Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : G55    

Bonds between two atoms of the molecule

Total Number of Bonds: 78


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C2 O39 C O sing 1.36 N N
2 C2 C3 C C doub 1.39 N Y
3 C2 C7 C C sing 1.39 N Y
4 O39 C40 O C sing 1.43 N N
5 C3 C4 C C sing 1.38 N Y
6 C4 C5 C C doub 1.38 N Y
7 C5 C6 C C sing 1.38 N Y
8 C5 S8 C S sing 1.76 N N
9 C6 C7 C C doub 1.38 N Y
10 S8 O9 S O doub 1.42 N N
11 S8 O10 S O doub 1.42 N N
12 S8 N11 S N sing 1.66 N N
13 N11 C12 N C sing 1.46 N N
14 N11 C16 N C sing 1.47 N N
15 C12 C13 C C sing 1.53 N N
16 C13 C14 C C sing 1.53 N N
17 C13 C15 C C sing 1.53 N N
18 C16 C17 C C sing 1.53 N N
19 C17 O18 C O sing 1.43 N N
20 C17 C19 C C sing 1.53 N N
21 C19 N20 C N sing 1.46 N N
22 C19 C32 C C sing 1.53 N N
23 N20 C21 N C sing 1.35 N N
24 C21 O22 C O doub 1.22 N N
25 C21 O23 C O sing 1.35 N N
26 O23 C24 O C sing 1.45 N N
27 C24 C25 C C sing 1.47 N N
28 C24 C30 C C sing 1.54 N N
29 C25 O26 C O sing 1.44 N N
30 O26 C27 O C sing 1.4 N N
31 C27 O28 C O sing 1.44 N N
32 O28 C29 O C sing 1.45 N N
33 C29 C30 C C sing 1.5 N N
34 C32 C38 C C sing 1.51 N N
35 C33 C34 C C doub 1.38 N Y
36 C33 C38 C C sing 1.38 N Y
37 C34 C35 C C sing 1.38 N Y
38 C35 C36 C C doub 1.38 N Y
39 C36 C37 C C sing 1.38 N Y
40 C37 C38 C C doub 1.38 N Y
41 C40 H40 C H sing 1.09 N N
42 C40 H40A C H sing 1.09 N N
43 C40 H40B C H sing 1.09 N N
44 C3 H3 C H sing 1.08 N N
45 C4 H4 C H sing 1.08 N N
46 C6 H6 C H sing 1.08 N N
47 C7 H7 C H sing 1.08 N N
48 C12 H12 C H sing 1.09 N N
49 C12 H12A C H sing 1.09 N N
50 C13 H13 C H sing 1.09 N N
51 C14 H14 C H sing 1.09 N N
52 C14 H14A C H sing 1.09 N N
53 C14 H14B C H sing 1.09 N N
54 C15 H15 C H sing 1.09 N N
55 C15 H15A C H sing 1.09 N N
56 C15 H15B C H sing 1.09 N N
57 C16 H16 C H sing 1.09 N N
58 C16 H16A C H sing 1.09 N N
59 C17 H17 C H sing 1.09 N N
60 O18 HO18 O H sing 0.97 N N
61 C19 H19 C H sing 1.09 N N
62 N20 HN20 N H sing 0.97 N N
63 C24 H24 C H sing 1.09 N N
64 C25 H25 C H sing 1.09 N N
65 C25 H25A C H sing 1.09 N N
66 C27 H27 C H sing 1.09 N N
67 C27 H27A C H sing 1.09 N N
68 C29 H29 C H sing 1.09 N N
69 C29 H29A C H sing 1.09 N N
70 C30 H30 C H sing 1.09 N N
71 C30 H30A C H sing 1.09 N N
72 C32 H32 C H sing 1.09 N N
73 C32 H32A C H sing 1.09 N N
74 C33 H33 C H sing 1.08 N N
75 C34 H34 C H sing 1.08 N N
76 C35 H35 C H sing 1.08 N N
77 C36 H36 C H sing 1.08 N N
78 C37 H37 C H sing 1.08 N N