Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GGI    

Bonds between two atoms of the molecule

Total Number of Bonds: 109


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C14 C13 C C doub 1.38 N Y
2 C14 C06 C C sing 1.38 N Y
3 C13 C09 C C sing 1.4 N Y
4 C05 C06 C C sing 1.51 N N
5 C05 C04 C C sing 1.53 N N
6 C06 C07 C C doub 1.38 N Y
7 C09 N10 C N sing 1.39 N N
8 C09 C08 C C doub 1.38 N Y
9 N10 C11 N C sing 1.32 N N
10 O26 C15 O C doub 1.21 N N
11 C28 C27 C C sing 1.53 N N
12 C28 C29 C C sing 1.51 N N
13 N03 C04 N C sing 1.48 N N
14 N03 C02 N C sing 1.37 N N
15 O56 S48 O S doub 1.42 N N
16 C04 C15 C C sing 1.51 N N
17 C41 C11 C C sing 1.5 N N
18 C41 C40 C C sing 1.53 N N
19 C15 N16 C N sing 1.35 N N
20 C07 C08 C C sing 1.38 N Y
21 C27 C02 C C sing 1.51 N N
22 C27 N47 C N sing 1.47 N N
23 C30 C29 C C doub 1.38 N Y
24 C30 C31 C C sing 1.38 N Y
25 C11 O12 C O doub 1.21 N N
26 C29 C46 C C sing 1.38 N Y
27 C02 O01 C O doub 1.21 N N
28 C54 C53 C C doub 1.38 N Y
29 C54 C49 C C sing 1.38 N Y
30 C53 C52 C C sing 1.38 N Y
31 N16 C17 N C sing 1.47 N N
32 C31 C32 C C doub 1.39 N Y
33 C38 N39 C N sing 1.47 N N
34 C38 C37 C C sing 1.53 N N
35 S48 C49 S C sing 1.76 N N
36 S48 N47 S N sing 1.66 N N
37 S48 O55 S O doub 1.42 N N
38 C40 N39 C N sing 1.5 N N
39 C17 C18 C C sing 1.51 N N
40 C49 C50 C C doub 1.38 N Y
41 C46 C45 C C doub 1.38 N Y
42 C52 C51 C C doub 1.38 N Y
43 N39 C42 N C sing 1.47 N N
44 C37 N36 C N sing 1.51 N N
45 C32 C45 C C sing 1.39 N Y
46 C32 N33 C N sing 1.4 N N
47 C50 C51 C C sing 1.38 N Y
48 N33 C34 N C sing 1.35 N N
49 C18 C25 C C doub 1.38 N Y
50 C18 C19 C C sing 1.38 N Y
51 C25 C24 C C sing 1.38 N Y
52 N36 C35 N C sing 1.52 N N
53 N36 C43 N C sing 1.51 N N
54 C42 C43 C C sing 1.53 N N
55 C34 O44 C O doub 1.21 N N
56 C34 C35 C C sing 1.51 N N
57 C19 C20 C C doub 1.38 N Y
58 C24 C21 C C doub 1.38 N Y
59 C20 C21 C C sing 1.38 N Y
60 C21 C22 C C sing 1.51 N N
61 C22 N23 C N sing 1.47 N N
62 C04 H041 C H sing 1.09 N N
63 C05 H051 C H sing 1.09 N N
64 C05 H052 C H sing 1.09 N N
65 C07 H071 C H sing 1.08 N N
66 C08 H081 C H sing 1.08 N N
67 C13 H131 C H sing 1.08 N N
68 C14 H141 C H sing 1.08 N N
69 C17 H172 C H sing 1.09 N N
70 C17 H171 C H sing 1.09 N N
71 C19 H191 C H sing 1.08 N N
72 C20 H201 C H sing 1.08 N N
73 C22 H222 C H sing 1.09 N N
74 C22 H221 C H sing 1.09 N N
75 C24 H241 C H sing 1.08 N N
76 C25 H251 C H sing 1.08 N N
77 C27 H271 C H sing 1.09 N N
78 C28 H281 C H sing 1.09 N N
79 C28 H282 C H sing 1.09 N N
80 C30 H301 C H sing 1.08 N N
81 C31 H311 C H sing 1.08 N N
82 C35 H351 C H sing 1.09 N N
83 C35 H352 C H sing 1.09 N N
84 C37 H371 C H sing 1.09 N N
85 C37 H372 C H sing 1.09 N N
86 C38 H381 C H sing 1.09 N N
87 C38 H382 C H sing 1.09 N N
88 C40 H401 C H sing 1.09 N N
89 C40 H402 C H sing 1.09 N N
90 C41 H411 C H sing 1.09 N N
91 C41 H412 C H sing 1.09 N N
92 C42 H422 C H sing 1.09 N N
93 C42 H421 C H sing 1.09 N N
94 C43 H431 C H sing 1.09 N N
95 C43 H432 C H sing 1.09 N N
96 C45 H451 C H sing 1.08 N N
97 C46 H461 C H sing 1.08 N N
98 C50 H501 C H sing 1.08 N N
99 C51 H511 C H sing 1.08 N N
100 C52 H521 C H sing 1.08 N N
101 C53 H531 C H sing 1.08 N N
102 C54 H541 C H sing 1.08 N N
103 N03 H031 N H sing 0.97 N N
104 N10 H101 N H sing 0.97 N N
105 N16 H161 N H sing 0.97 N N
106 N23 H231 N H sing 1.01 N N
107 N23 H232 N H sing 1.01 N N
108 N33 H331 N H sing 0.97 N N
109 N47 H471 N H sing 0.97 N N