Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GHW    

Bonds between two atoms of the molecule

Total Number of Bonds: 51


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N3 C4 N C sing 1.35 N N
2 C4 C5 C C doub 1.39 N Y
3 C4 S4 C S sing 1.76 N Y
4 C6 C5 C C sing 1.43 N N
5 C5 C1 C C sing 1.45 N Y
6 N1 C6 N C sing 1.35 N N
7 C6 O6 C O doub 1.22 N N
8 C3 C13 C C sing 1.51 N N
9 C13 H13 C H sing 1.09 N N
10 C13 H13A C H sing 1.09 N N
11 C13 H13B C H sing 1.09 N N
12 C2 N1 C N sing 1.36 N N
13 N1 HN1 N H sing 0.97 N N
14 N2 C2 N C sing 1.37 N N
15 N2 HN2 N H sing 0.97 N N
16 N2 HN2A N H sing 0.97 N N
17 S4 C3 S C sing 1.75 N Y
18 C1 C3 C C doub 1.33 N Y
19 C2 N3 C N doub 1.31 N N
20 C1 SAT C S sing 1.76 N N
21 CAZ SAT C S sing 1.76 N N
22 CAI CAZ C C doub 1.39 N Y
23 CAZ CAJ C C sing 1.39 N Y
24 CAL CAJ C C doub 1.37 N Y
25 CAJ HAJ C H sing 1.08 N N
26 CBA CAL C C sing 1.4 N Y
27 CAL HAL C H sing 1.08 N N
28 CAK CAI C C sing 1.37 N Y
29 CAI HAI C H sing 1.08 N N
30 CAK CBA C C doub 1.4 N Y
31 CAK HAK C H sing 1.08 N N
32 CAX CBA C C sing 1.47 N N
33 NAS CAX N C sing 1.35 N N
34 CAX OAE C O doub 1.22 N N
35 CAP NAS C N sing 1.46 N N
36 NAS HNAS N H sing 0.97 N N
37 CBG CAP C C sing 1.53 N N
38 CAW CAP C C sing 1.51 N N
39 CAP HAP C H sing 1.09 N N
40 OAG CAW O C doub 1.21 N N
41 CAW OAD C O sing 1.34 N N
42 OAD HOAD O H sing 0.97 N N
43 CAN CBG C C sing 1.53 N N
44 CBG HBG C H sing 1.09 N N
45 CBG HBGA C H sing 1.09 N N
46 CAV CAN C C sing 1.51 N N
47 CAN HAN C H sing 1.09 N N
48 CAN HANA C H sing 1.09 N N
49 OAC CAV O C doub 1.21 N N
50 CAV OXT C O sing 1.34 N N
51 OXT HXT O H sing 0.97 N N