Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GHY    

Bonds between two atoms of the molecule

Total Number of Bonds: 58


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C27 O28 C O sing 1.43 N N
2 C27 C26 C C sing 1.53 N N
3 C29 C26 C C sing 1.53 N N
4 C29 C30 C C sing 1.53 N N
5 C26 N24 C N sing 1.46 N N
6 O1 C34 O C doub 1.21 N N
7 C34 C30 C C sing 1.51 N N
8 C34 N33 C N sing 1.34 N N
9 C30 C31 C C sing 1.55 N N
10 C31 C32 C C sing 1.55 N N
11 N24 C23 N C sing 1.35 N N
12 N33 C32 N C sing 1.47 N N
13 O25 C23 O C doub 1.21 N N
14 C23 C15 C C sing 1.51 N N
15 C15 C16 C C sing 1.53 N N
16 C15 N13 C N sing 1.46 N N
17 C16 C17 C C sing 1.51 N N
18 C17 C22 C C doub 1.38 N Y
19 C17 C18 C C sing 1.38 N Y
20 N13 C12 N C sing 1.35 N N
21 O14 C12 O C doub 1.22 N N
22 C22 C21 C C sing 1.38 N Y
23 C18 C19 C C doub 1.38 N Y
24 C12 O11 C O sing 1.35 N N
25 C21 C20 C C doub 1.38 N Y
26 C19 C20 C C sing 1.38 N Y
27 O11 C10 O C sing 1.45 N N
28 C1 C10 C C sing 1.53 N N
29 C10 C5 C C sing 1.53 N N
30 C15 H1 C H sing 1.09 N N
31 C16 H2 C H sing 1.09 N N
32 C16 H3 C H sing 1.09 N N
33 C22 H4 C H sing 1.08 N N
34 C21 H5 C H sing 1.08 N N
35 C20 H6 C H sing 1.08 N N
36 C19 H7 C H sing 1.08 N N
37 C18 H8 C H sing 1.08 N N
38 N13 H9 N H sing 0.97 N N
39 C10 H10 C H sing 1.09 N N
40 C1 H11 C H sing 1.09 N N
41 C1 H12 C H sing 1.09 N N
42 C1 H13 C H sing 1.09 N N
43 C5 H14 C H sing 1.09 N N
44 C5 H15 C H sing 1.09 N N
45 C5 H16 C H sing 1.09 N N
46 N24 H17 N H sing 0.97 N N
47 C26 H18 C H sing 1.09 N N
48 C27 H19 C H sing 1.09 N N
49 C27 H20 C H sing 1.09 N N
50 O28 H21 O H sing 0.97 N N
51 C29 H22 C H sing 1.09 N N
52 C29 H23 C H sing 1.09 N N
53 C30 H24 C H sing 1.09 N N
54 C31 H25 C H sing 1.09 N N
55 C31 H26 C H sing 1.09 N N
56 C32 H27 C H sing 1.09 N N
57 C32 H28 C H sing 1.09 N N
58 N33 H29 N H sing 0.97 N N