Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GJT    

Bonds between two atoms of the molecule

Total Number of Bonds: 53


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O4 C17 O C doub 1.22 N N
2 O5 C17 O C sing 1.35 N N
3 C17 C8 C C sing 1.47 N N
4 C8 C9 C C sing 1.5 N N
5 C8 C7 C C doub 1.32 N N
6 C9 C10 C C sing 1.53 N N
7 C7 C6 C C sing 1.5 N N
8 N4 N2 N N sing 1.29 N Y
9 N4 N3 N N doub 1.29 N Y
10 C10 N2 C N sing 1.46 N N
11 C10 C11 C C sing 1.53 N N
12 N2 C14 N C sing 1.35 N Y
13 N3 C15 N C sing 1.34 N Y
14 C14 C15 C C doub 1.35 N Y
15 C6 C11 C C sing 1.53 N N
16 C6 O1 C O sing 1.43 N N
17 C15 C16 C C sing 1.51 N N
18 C11 N1 C N sing 1.47 N N
19 C16 O3 C O sing 1.43 N N
20 O1 C3 O C sing 1.43 N N
21 C1 C2 C C sing 1.53 N N
22 N1 C12 N C sing 1.35 N N
23 C2 C3 C C sing 1.53 N N
24 C3 C4 C C sing 1.53 N N
25 O2 C12 O C doub 1.21 N N
26 C12 C13 C C sing 1.51 N N
27 C4 C5 C C sing 1.53 N N
28 N1 H1 N H sing 0.97 N N
29 C4 H2 C H sing 1.09 N N
30 C4 H3 C H sing 1.09 N N
31 C5 H4 C H sing 1.09 N N
32 C5 H5 C H sing 1.09 N N
33 C5 H6 C H sing 1.09 N N
34 C6 H7 C H sing 1.09 N N
35 C7 H9 C H sing 1.08 N N
36 C10 H11 C H sing 1.09 N N
37 C13 H12 C H sing 1.09 N N
38 C13 H13 C H sing 1.09 N N
39 C13 H14 C H sing 1.09 N N
40 C1 H15 C H sing 1.09 N N
41 C1 H16 C H sing 1.09 N N
42 C1 H17 C H sing 1.09 N N
43 C2 H18 C H sing 1.09 N N
44 C2 H19 C H sing 1.09 N N
45 C3 H20 C H sing 1.09 N N
46 C9 H21 C H sing 1.09 N N
47 C9 H22 C H sing 1.09 N N
48 C11 H23 C H sing 1.09 N N
49 C14 H24 C H sing 1.08 N N
50 C16 H25 C H sing 1.09 N N
51 C16 H26 C H sing 1.09 N N
52 O3 H27 O H sing 0.97 N N
53 O5 H28 O H sing 0.97 N N