Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : GV0    

Bonds between two atoms of the molecule

Total Number of Bonds: 88


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CAV CAZ C C sing 1.53 N N
2 CAV NAG C N sing 1.47 N N
3 CAZ NAI C N sing 1.47 N N
4 NAG CAW N C sing 1.47 N N
5 NAG CAQ N C sing 1.47 N N
6 NAI CBC N C sing 1.47 N N
7 NAI CBA N C sing 1.47 N N
8 CAW CBA C C sing 1.53 N N
9 CAQ CAU C C sing 1.53 N N
10 CAQ CAT C C sing 1.53 N N
11 CAU CAY C C sing 1.53 N N
12 CAT CAX C C sing 1.53 N N
13 CAY NAH C N sing 1.47 N N
14 NAH CAX N C sing 1.47 N N
15 NAH CBB N C sing 1.35 N N
16 OAE CBB O C doub 1.22 N N
17 CBB NAL C N sing 1.35 N N
18 NAL CBJ N C sing 1.39 N N
19 CBQ CBJ C C doub 1.39 N Y
20 CBQ CBR C C sing 1.39 N Y
21 CBJ NAM C N sing 1.32 N Y
22 OAF CBR O C sing 1.36 N N
23 OAF CBO O C sing 1.36 N N
24 CBR CBS C C doub 1.39 N Y
25 NAM CBT N C doub 1.32 N Y
26 CBO CBL C C doub 1.39 N Y
27 CBO CBK C C sing 1.39 N Y
28 CBL CBG C C sing 1.38 N Y
29 CBS CBT C C sing 1.38 N Y
30 CBK CBF C C doub 1.38 N Y
31 CBG CBD C C doub 1.39 N Y
32 CBF CBD C C sing 1.39 N Y
33 CBF FAA C F sing 1.35 N N
34 CBD NAJ C N sing 1.4 N N
35 OAC CAR O C doub 1.21 N N
36 NAJ CAR N C sing 1.35 N N
37 CAR CAN C C sing 1.51 N N
38 CAO CAN C C sing 1.53 N N
39 CAO CAP C C sing 1.53 N N
40 CAN CAP C C sing 1.53 N N
41 CAN CAS C C sing 1.51 N N
42 OAD CAS O C doub 1.21 N N
43 CAS NAK C N sing 1.35 N N
44 NAK CBE N C sing 1.4 N N
45 CBE CBI C C doub 1.39 N Y
46 CBE CBH C C sing 1.39 N Y
47 CBI CBN C C sing 1.38 N Y
48 CBH CBM C C doub 1.38 N Y
49 CBN CBP C C doub 1.39 N Y
50 CBM CBP C C sing 1.38 N Y
51 CBP FAB C F sing 1.35 N N
52 CAV H1 C H sing 1.09 N N
53 CAV H2 C H sing 1.09 N N
54 CAZ H3 C H sing 1.09 N N
55 CAZ H4 C H sing 1.09 N N
56 CBC H6 C H sing 1.09 N N
57 CBC H7 C H sing 1.09 N N
58 CBC H8 C H sing 1.09 N N
59 CBA H9 C H sing 1.09 N N
60 CBA H10 C H sing 1.09 N N
61 CAW H11 C H sing 1.09 N N
62 CAW H12 C H sing 1.09 N N
63 CAQ H14 C H sing 1.09 N N
64 CAU H15 C H sing 1.09 N N
65 CAU H16 C H sing 1.09 N N
66 CAY H17 C H sing 1.09 N N
67 CAY H18 C H sing 1.09 N N
68 CAT H19 C H sing 1.09 N N
69 CAT H20 C H sing 1.09 N N
70 CAX H21 C H sing 1.09 N N
71 CAX H22 C H sing 1.09 N N
72 NAL H23 N H sing 0.97 N N
73 CBQ H24 C H sing 1.08 N N
74 CBT H25 C H sing 1.08 N N
75 CBS H26 C H sing 1.08 N N
76 CBK H27 C H sing 1.08 N N
77 CBL H28 C H sing 1.08 N N
78 CBG H29 C H sing 1.08 N N
79 NAJ H30 N H sing 0.97 N N
80 CAO H31 C H sing 1.09 N N
81 CAO H32 C H sing 1.09 N N
82 CAP H33 C H sing 1.09 N N
83 CAP H34 C H sing 1.09 N N
84 NAK H35 N H sing 0.97 N N
85 CBH H36 C H sing 1.08 N N
86 CBM H37 C H sing 1.08 N N
87 CBN H38 C H sing 1.08 N N
88 CBI H39 C H sing 1.08 N N