Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : H0I    

Bonds between two atoms of the molecule

Total Number of Bonds: 57


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C02 C01 C C sing 1.53 N N
2 C03 C02 C C sing 1.51 N N
3 N04 C03 N C doub 1.33 N Y
4 C05 N04 C N sing 1.32 N Y
5 N06 C05 N C sing 1.39 N N
6 N07 C05 N C doub 1.32 N Y
7 C08 N07 C N sing 1.33 N Y
8 N09 C08 N C sing 1.39 N N
9 C10 C08 C C doub 1.4 N Y
10 O11 C10 O C sing 1.36 N N
11 C12 O11 C O sing 1.43 N N
12 C13 C12 C C sing 1.53 N N
13 C14 C13 C C sing 1.53 N N
14 C15 C14 C C sing 1.53 N N
15 O16 C15 O C sing 1.43 N N
16 C17 O16 C O sing 1.36 N N
17 C18 C17 C C doub 1.39 N Y
18 C19 C18 C C sing 1.38 N Y
19 C20 C19 C C doub 1.38 N Y
20 C21 C20 C C sing 1.38 N Y
21 C23 C22 C C sing 1.53 N N
22 C24 C23 C C sing 1.53 N N
23 C25 C24 C C sing 1.51 N N
24 O26 C25 O C doub 1.21 N N
25 O27 C25 O C sing 1.34 N N
26 C22 C21 C C sing 1.51 N N
27 C28 C21 C C doub 1.38 N Y
28 C03 C10 C C sing 1.38 N Y
29 C17 C28 C C sing 1.39 N Y
30 C01 H012 C H sing 1.09 N N
31 C01 H011 C H sing 1.09 N N
32 C01 H013 C H sing 1.09 N N
33 C02 H021 C H sing 1.09 N N
34 C02 H022 C H sing 1.09 N N
35 N06 H062 N H sing 0.97 N N
36 N06 H061 N H sing 0.97 N N
37 N09 H092 N H sing 0.97 N N
38 N09 H091 N H sing 0.97 N N
39 C12 H121 C H sing 1.09 N N
40 C12 H122 C H sing 1.09 N N
41 C13 H132 C H sing 1.09 N N
42 C13 H131 C H sing 1.09 N N
43 C14 H142 C H sing 1.09 N N
44 C14 H141 C H sing 1.09 N N
45 C15 H152 C H sing 1.09 N N
46 C15 H151 C H sing 1.09 N N
47 C18 H181 C H sing 1.08 N N
48 C19 H191 C H sing 1.08 N N
49 C20 H201 C H sing 1.08 N N
50 C22 H221 C H sing 1.09 N N
51 C22 H222 C H sing 1.09 N N
52 C23 H231 C H sing 1.09 N N
53 C23 H232 C H sing 1.09 N N
54 C24 H242 C H sing 1.09 N N
55 C24 H241 C H sing 1.09 N N
56 O27 H1 O H sing 0.97 N N
57 C28 H281 C H sing 1.08 N N