Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : HLW    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N01 C02 N C doub 1.3 N Y
2 N01 C05 N C sing 1.34 N Y
3 C02 N03 C N sing 1.36 N Y
4 N03 C04 N C sing 1.37 N Y
5 N03 C12 N C sing 1.39 N N
6 C04 C05 C C doub 1.35 N Y
7 C1' C2' C C doub 1.38 N Y
8 C1' C22 C C sing 1.51 N N
9 C1' C6' C C sing 1.38 N Y
10 N11 C12 N C doub 1.32 N Y
11 N11 C16 N C sing 1.32 N Y
12 C12 N13 C N sing 1.32 N Y
13 N13 C14 N C doub 1.32 N Y
14 C14 C15 C C sing 1.39 N Y
15 C14 C17 C C sing 1.51 N N
16 C15 C16 C C doub 1.39 N Y
17 C17 C18 C C sing 1.53 N N
18 C18 N19 C N sing 1.47 N N
19 N19 C20 N C sing 1.47 N N
20 C2' C3' C C sing 1.38 N Y
21 C20 C21 C C sing 1.53 N N
22 C21 C22 C C sing 1.53 N N
23 C3' C4' C C doub 1.38 N Y
24 C3' CL7' C CL sing 1.74 N N
25 C4' C5' C C sing 1.38 N Y
26 C5' C6' C C doub 1.38 N Y
27 C02 H02 C H sing 1.08 N N
28 C04 H04 C H sing 1.08 N N
29 C05 H05 C H sing 1.08 N N
30 C15 H15 C H sing 1.08 N N
31 C16 H16 C H sing 1.08 N N
32 C17 H17 C H sing 1.09 N N
33 C17 H17A C H sing 1.09 N N
34 C18 H18 C H sing 1.09 N N
35 C18 H18A C H sing 1.09 N N
36 N19 HN19 N H sing 1.01 N N
37 C2' H2' C H sing 1.08 N N
38 C20 H20 C H sing 1.09 N N
39 C20 H20A C H sing 1.09 N N
40 C21 H21 C H sing 1.09 N N
41 C21 H21A C H sing 1.09 N N
42 C22 H22 C H sing 1.09 N N
43 C22 H22A C H sing 1.09 N N
44 C4' H4' C H sing 1.08 N N
45 C5' H5' C H sing 1.08 N N
46 C6' H6' C H sing 1.08 N N