Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : HOJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 64


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C23 C19 C C sing 1.51 N N
2 O2 C19 O C doub 1.21 N N
3 C19 N2 C N sing 1.35 N N
4 C21 N2 C N sing 1.47 N N
5 C21 C20 C C sing 1.53 N N
6 N2 C22 N C sing 1.47 N N
7 O1 C18 O C doub 1.21 N N
8 C20 C16 C C sing 1.51 N N
9 C22 C18 C C sing 1.51 N N
10 C22 C11 C C sing 1.51 N N
11 C18 N3 C N sing 1.35 N N
12 N3 C13 N C sing 1.4 N N
13 C16 C11 C C doub 1.38 N Y
14 C16 N1 C N sing 1.33 N Y
15 C6 C13 C C doub 1.39 N Y
16 C6 C9 C C sing 1.38 N Y
17 C11 C3 C C sing 1.39 N Y
18 C13 C5 C C sing 1.39 N Y
19 C24 O3 C O sing 1.43 N N
20 C9 C14 C C doub 1.39 N Y
21 N1 C17 N C doub 1.32 N Y
22 C3 C10 C C doub 1.38 N Y
23 O3 C15 O C sing 1.36 N N
24 C5 C8 C C doub 1.38 N Y
25 C14 C8 C C sing 1.39 N Y
26 C14 O4 C O sing 1.36 N N
27 C26 O4 C O sing 1.43 N N
28 C26 C12 C C sing 1.51 N N
29 C17 C10 C C sing 1.39 N Y
30 C17 O5 C O sing 1.36 N N
31 C15 C12 C C doub 1.39 N Y
32 C15 C7 C C sing 1.39 N Y
33 C12 C4 C C sing 1.38 N Y
34 C7 C2 C C doub 1.38 N Y
35 O5 C25 O C sing 1.43 N N
36 C4 C1 C C doub 1.38 N Y
37 C2 C1 C C sing 1.38 N Y
38 N3 H1 N H sing 0.97 N N
39 C4 H2 C H sing 1.08 N N
40 C5 H3 C H sing 1.08 N N
41 C6 H4 C H sing 1.08 N N
42 C7 H5 C H sing 1.08 N N
43 C8 H6 C H sing 1.08 N N
44 C10 H7 C H sing 1.08 N N
45 C20 H8 C H sing 1.09 N N
46 C20 H9 C H sing 1.09 N N
47 C21 H10 C H sing 1.09 N N
48 C21 H11 C H sing 1.09 N N
49 C22 H12 C H sing 1.09 N N
50 C24 H13 C H sing 1.09 N N
51 C24 H14 C H sing 1.09 N N
52 C24 H15 C H sing 1.09 N N
53 C26 H16 C H sing 1.09 N N
54 C26 H17 C H sing 1.09 N N
55 C1 H18 C H sing 1.08 N N
56 C2 H19 C H sing 1.08 N N
57 C3 H20 C H sing 1.08 N N
58 C9 H21 C H sing 1.08 N N
59 C23 H22 C H sing 1.09 N N
60 C23 H23 C H sing 1.09 N N
61 C23 H24 C H sing 1.09 N N
62 C25 H25 C H sing 1.09 N N
63 C25 H26 C H sing 1.09 N N
64 C25 H27 C H sing 1.09 N N