Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : HOS    

Bonds between two atoms of the molecule

Total Number of Bonds: 102


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C23 C22 C C sing 1.53 N N
2 C22 C2 C C sing 1.53 N N
3 C2 C24 C C sing 1.54 N N
4 C2 O1 C O sing 1.41 N N
5 C2 C3 C C sing 1.52 N N
6 O1 C1 O C sing 1.34 N N
7 C1 C13 C C doub 1.38 N Y
8 C1 C12 C C sing 1.4 N Y
9 C13 C9 C C sing 1.38 N Y
10 C12 O5 C O sing 1.36 N N
11 C12 C11 C C doub 1.38 N Y
12 C11 CL1 C CL sing 1.74 N N
13 C11 C10 C C sing 1.38 N Y
14 C10 C9 C C doub 1.38 N Y
15 C9 C8 C C sing 1.51 N N
16 C8 O4 C O sing 1.43 N N
17 C8 C7 C C sing 1.53 N N
18 C7 N6 C N sing 1.47 N N
19 C7 C6 C C sing 1.51 N N
20 N6 C28 N C sing 1.47 N N
21 C6 O3 C O doub 1.21 N N
22 C6 N2 C N sing 1.37 N N
23 N2 C5 N C sing 1.48 N N
24 C5 C25 C C sing 1.5 N N
25 C5 C4 C C sing 1.5 N N
26 C25 C27 C C sing 1.51 N N
27 C25 C26 C C doub 1.31 N N
28 C4 O2 C O doub 1.22 N N
29 C4 N1 C N sing 1.37 N N
30 N1 C3 N C sing 1.48 N N
31 C3 C14 C C sing 1.51 N N
32 C14 O6 C O doub 1.21 N N
33 C14 N3 C N sing 1.35 N N
34 N3 C29 N C sing 1.47 N N
35 N3 C15 N C sing 1.47 N N
36 C29 C30 C C sing 1.51 N N
37 C30 C31 C C doub 1.3 N N
38 C31 C15 C C sing 1.51 N N
39 C15 C16 C C sing 1.51 N N
40 C16 O7 C O doub 1.21 N N
41 C16 N4 C N sing 1.35 N N
42 N4 C17 N C sing 1.4 N N
43 C17 C32 C C doub 1.34 N N
44 C17 C18 C C sing 1.47 N N
45 C32 C35 C C sing 1.51 N N
46 C32 C33 C C sing 1.51 N N
47 C33 C34 C C sing 1.53 N N
48 C18 O8 C O doub 1.22 N N
49 C18 N5 C N sing 1.35 N N
50 N5 C19 N C sing 1.38 N N
51 C19 C36 C C sing 1.48 N N
52 C19 C20 C C doub 1.35 N N
53 C36 O9 C O doub 1.21 N N
54 C36 O10 C O sing 1.35 N N
55 C20 C21 C C sing 1.47 N N
56 C21 O11 C O sing 1.35 N N
57 C21 O12 C O doub 1.22 N N
58 C23 H23 C H sing 1.09 N N
59 C23 H23A C H sing 1.09 N N
60 C23 H23B C H sing 1.09 N N
61 C22 H22 C H sing 1.09 N N
62 C22 H22A C H sing 1.09 N N
63 C24 H24 C H sing 1.09 N N
64 C24 H24A C H sing 1.09 N N
65 C24 H24B C H sing 1.09 N N
66 C13 H13 C H sing 1.08 N N
67 O5 HO5 O H sing 0.97 N N
68 C10 H10 C H sing 1.08 N N
69 C8 H8 C H sing 1.09 N N
70 O4 HO4 O H sing 0.97 N N
71 C7 H7 C H sing 1.09 N N
72 N6 HN6 N H sing 1.01 N N
73 C28 H28 C H sing 1.09 N N
74 C28 H28A C H sing 1.09 N N
75 C28 H28B C H sing 1.09 N N
76 N2 HN2 N H sing 0.98 E N
77 C5 H5 C H sing 1.1 N N
78 C27 H27 C H sing 1.09 N N
79 C27 H27A C H sing 1.09 N N
80 C27 H27B C H sing 1.09 N N
81 C26 H26 C H sing 1.08 N N
82 C26 H26A C H sing 1.08 N N
83 N1 HN1 N H sing 0.97 N N
84 C3 H3 C H sing 1.1 N N
85 C29 H29 C H sing 1.09 N N
86 C29 H29A C H sing 1.09 N N
87 C30 H30 C H sing 1.08 N N
88 C31 H31 C H sing 1.08 N N
89 C15 H15 C H sing 1.09 N N
90 N4 HN4 N H sing 0.97 N N
91 C35 H35 C H sing 1.09 N N
92 C35 H35A C H sing 1.09 N N
93 C35 H35B C H sing 1.09 N N
94 C33 H33 C H sing 1.09 E N
95 C33 H33A C H sing 1.09 N N
96 C34 H34 C H sing 1.09 N N
97 C34 H34A C H sing 1.09 N N
98 C34 H34B C H sing 1.09 N N
99 N5 HN5 N H sing 0.97 N N
100 O10 HO10 O H sing 0.97 N N
101 C20 H20 C H sing 1.08 N N
102 O11 HO11 O H sing 0.97 N N