Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : HT5    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O2 C12 O C doub 1.21 N N
2 C12 SD C S sing 1.72 N N
3 C12 C11 C C sing 1.5 N N
4 SD C14 S C sing 1.82 N N
5 C14 C13 C C sing 1.54 N N
6 C13 C11 C C sing 1.53 N N
7 C11 N2 C N sing 1.46 N N
8 N2 C10 N C sing 1.35 N N
9 C10 O1 C O doub 1.21 N N
10 C10 C9 C C sing 1.51 N N
11 C9 C2 C C sing 1.53 N N
12 C2 C1 C C sing 1.53 N N
13 C1 C50 C C sing 1.53 N N
14 C50 C3 C C sing 1.53 N N
15 C3 C4 C C sing 1.53 N N
16 C4 C5 C C sing 1.53 N N
17 C5 C6 C C sing 1.53 N N
18 C6 C8 C C sing 1.53 N N
19 C11 H11 C H sing 1.09 N N
20 C14 H141 C H sing 1.09 N N
21 C14 H142 C H sing 1.09 N N
22 C13 H131 C H sing 1.09 N N
23 C13 H132 C H sing 1.09 N N
24 N2 HA N H sing 0.97 N N
25 C9 H9C1 C H sing 1.09 N N
26 C9 H9C2 C H sing 1.09 N N
27 C2 H2C1 C H sing 1.09 N N
28 C2 H2C2 C H sing 1.09 N N
29 C1 H1C1 C H sing 1.09 N N
30 C1 H1C2 C H sing 1.09 N N
31 C50 H501 C H sing 1.09 N N
32 C50 H502 C H sing 1.09 N N
33 C3 H3C1 C H sing 1.09 N N
34 C3 H3C2 C H sing 1.09 N N
35 C4 H4C1 C H sing 1.09 N N
36 C4 H4C2 C H sing 1.09 N N
37 C5 H5C1 C H sing 1.09 N N
38 C5 H5C2 C H sing 1.09 N N
39 C6 H6C1 C H sing 1.09 N N
40 C6 H6C2 C H sing 1.09 N N
41 C8 H8C1 C H sing 1.09 N N
42 C8 H8C2 C H sing 1.09 N N
43 C8 H8C3 C H sing 1.09 N N