Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : I35    

Bonds between two atoms of the molecule

Total Number of Bonds: 72


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C12 C11 C C sing 1.53 N N
2 C12 C13 C C sing 1.53 N N
3 O15 C10 O C sing 1.34 N N
4 O15 C9 O C sing 1.45 N N
5 C10 O16 C O doub 1.21 N N
6 C10 C11 C C sing 1.51 N N
7 O14 C14 O C sing 1.34 N N
8 O14 C8 O C sing 1.45 N N
9 C14 O17 C O doub 1.21 N N
10 C14 C15 C C sing 1.51 N N
11 C15 C16 C C sing 1.53 N N
12 C8 C9 C C sing 1.53 N N
13 C8 C7 C C sing 1.53 N N
14 O12 P1 O P doub 1.48 N N
15 C16 C17 C C sing 1.53 N N
16 O13 C7 O C sing 1.43 N N
17 O13 P1 O P sing 1.61 N N
18 P1 O11 P O sing 1.61 N N
19 P1 O1 P O sing 1.61 N N
20 O1 C1 O C sing 1.43 N N
21 C1 C2 C C sing 1.53 N N
22 C1 C6 C C sing 1.53 N N
23 O2 C2 O C sing 1.43 N N
24 C2 C3 C C sing 1.53 N N
25 O6 C6 O C sing 1.43 N N
26 C6 C5 C C sing 1.53 N N
27 C3 O3 C O sing 1.43 N N
28 C3 C4 C C sing 1.53 N N
29 O3 P3 O P sing 1.61 N N
30 O33 P3 O P doub 1.48 N N
31 C5 C4 C C sing 1.53 N N
32 C5 O5 C O sing 1.43 N N
33 O31 P3 O P sing 1.61 N N
34 C4 O4 C O sing 1.43 N N
35 O52 P5 O P doub 1.48 N N
36 P3 O32 P O sing 1.61 N N
37 O5 P5 O P sing 1.61 N N
38 P5 O51 P O sing 1.61 N N
39 P5 O53 P O sing 1.61 N N
40 C1 H1 C H sing 1.09 N N
41 C2 H2 C H sing 1.09 N N
42 C3 H3 C H sing 1.09 N N
43 C4 H4 C H sing 1.09 N N
44 C5 H5 C H sing 1.09 N N
45 C6 H6 C H sing 1.09 N N
46 O2 H7 O H sing 0.97 N N
47 O4 H8 O H sing 0.97 N N
48 O6 H9 O H sing 0.97 N N
49 O11 H10 O H sing 0.97 N N
50 O31 H11 O H sing 0.97 N N
51 O32 H12 O H sing 0.97 N N
52 O51 H13 O H sing 0.97 N N
53 O53 H14 O H sing 0.97 N N
54 C7 H15 C H sing 1.09 N N
55 C7 H16 C H sing 1.09 N N
56 C8 H17 C H sing 1.09 N N
57 C9 H18 C H sing 1.09 N N
58 C9 H19 C H sing 1.09 N N
59 C11 H20 C H sing 1.09 N N
60 C11 H21 C H sing 1.09 N N
61 C12 H22 C H sing 1.09 N N
62 C12 H23 C H sing 1.09 N N
63 C13 H24 C H sing 1.09 N N
64 C13 H25 C H sing 1.09 N N
65 C13 H26 C H sing 1.09 N N
66 C15 H27 C H sing 1.09 N N
67 C15 H28 C H sing 1.09 N N
68 C16 H29 C H sing 1.09 N N
69 C16 H30 C H sing 1.09 N N
70 C17 H31 C H sing 1.09 N N
71 C17 H32 C H sing 1.09 N N
72 C17 H33 C H sing 1.09 N N