Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : IJJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 55


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C7 O1 C O sing 1.43 N N
2 O1 C6 O C sing 1.36 N N
3 O3 N2 O N sing 1.21 N Y
4 O3 C11 O C sing 1.34 N Y
5 O2 C10 O C doub 1.21 N N
6 N2 C12 N C doub 1.31 N Y
7 C6 C5 C C doub 1.38 N Y
8 C6 C1 C C sing 1.39 N Y
9 C5 C4 C C sing 1.38 N Y
10 C10 C11 C C sing 1.48 N N
11 C10 N C N sing 1.35 N N
12 C11 N1 C N doub 1.32 N Y
13 C14 C15 C C doub 1.38 N Y
14 C14 C13 C C sing 1.39 N Y
15 C12 C13 C C sing 1.48 N N
16 C12 N1 C N sing 1.35 N Y
17 O C1 O C sing 1.36 N N
18 O C O C sing 1.43 N N
19 C8 C4 C C sing 1.51 N N
20 C8 C9 C C sing 1.53 N N
21 C4 C3 C C doub 1.38 N Y
22 C1 C2 C C doub 1.38 N Y
23 C15 C16 C C sing 1.39 N Y
24 C13 C18 C C doub 1.39 N Y
25 N C9 N C sing 1.46 N N
26 C3 C2 C C sing 1.38 N Y
27 C20 O5 C O sing 1.43 N N
28 C16 O5 C O sing 1.36 N N
29 C16 C17 C C doub 1.39 N Y
30 C18 C17 C C sing 1.38 N Y
31 C17 O4 C O sing 1.36 N N
32 O4 C19 O C sing 1.43 N N
33 C7 H1 C H sing 1.09 N N
34 C7 H2 C H sing 1.09 N N
35 C7 H3 C H sing 1.09 N N
36 C8 H4 C H sing 1.09 N N
37 C8 H5 C H sing 1.09 N N
38 C9 H6 C H sing 1.09 N N
39 C9 H7 C H sing 1.09 N N
40 C5 H8 C H sing 1.08 N N
41 C3 H9 C H sing 1.08 N N
42 C2 H10 C H sing 1.08 N N
43 N H11 N H sing 0.97 N N
44 C H12 C H sing 1.09 N N
45 C H13 C H sing 1.09 N N
46 C H14 C H sing 1.09 N N
47 C18 H15 C H sing 1.08 N N
48 C19 H16 C H sing 1.09 N N
49 C19 H17 C H sing 1.09 N N
50 C19 H18 C H sing 1.09 N N
51 C20 H19 C H sing 1.09 N N
52 C20 H20 C H sing 1.09 N N
53 C20 H21 C H sing 1.09 N N
54 C15 H22 C H sing 1.08 N N
55 C14 H23 C H sing 1.08 N N