Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : IX7    

Bonds between two atoms of the molecule

Total Number of Bonds: 228


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O9 C26 O C sing 1.43 N N
2 O10 C27 O C sing 1.43 N N
3 C26 C25 C C sing 1.53 N N
4 O6 C22 O C sing 1.43 N N
5 C25 C27 C C sing 1.53 N N
6 C25 O8 C O sing 1.43 N N
7 C27 C28 C C sing 1.53 N N
8 O5 C21 O C sing 1.43 N N
9 C22 C21 C C sing 1.53 N N
10 C22 C23 C C sing 1.53 N N
11 O8 C24 O C sing 1.43 N N
12 C28 C29 C C sing 1.53 N N
13 C28 O11 C O sing 1.43 N N
14 C21 C20 C C sing 1.53 N N
15 C29 C24 C C sing 1.53 N N
16 C29 O12 C O sing 1.43 N N
17 O7 C24 O C sing 1.43 N N
18 O7 C23 O C sing 1.43 N N
19 C23 C30 C C sing 1.53 N N
20 C20 O4 C O sing 1.43 N N
21 C20 C19 C C sing 1.53 N N
22 O22 C68 O C sing 1.43 N N
23 C68 C67 C C sing 1.53 N N
24 C68 C69 C C sing 1.53 N N
25 O3 C19 O C sing 1.43 N N
26 O3 C18 O C sing 1.43 N N
27 C30 C19 C C sing 1.53 N N
28 C30 O13 C O sing 1.43 N N
29 C67 C18 C C sing 1.53 N N
30 C67 O21 C O sing 1.43 N N
31 O23 C69 O C sing 1.43 N N
32 C18 O2 C O sing 1.43 N N
33 C69 C17 C C sing 1.53 N N
34 O13 P O P sing 1.61 N N
35 C17 O2 C O sing 1.43 N N
36 C17 C16 C C sing 1.53 N N
37 C16 O1 C O sing 1.45 N N
38 O15 P O P sing 1.61 N N
39 P O14 P O doub 1.48 N N
40 P O16 P O sing 1.61 N N
41 O1 C15 O C sing 1.34 N N
42 O16 C31 O C sing 1.43 N N
43 C31 C32 C C sing 1.53 N N
44 C15 O C O doub 1.21 N N
45 C15 C14 C C sing 1.51 N N
46 O19 C32 O C sing 1.45 N N
47 O19 C56 O C sing 1.34 N N
48 C33 C32 C C sing 1.53 N N
49 C33 O17 C O sing 1.45 N N
50 C14 C13 C C sing 1.53 N N
51 C13 C12 C C sing 1.53 N N
52 O17 C34 O C sing 1.34 N N
53 C56 C57 C C sing 1.51 N N
54 C56 O20 C O doub 1.21 N N
55 C57 C58 C C sing 1.53 N N
56 C34 O18 C O doub 1.21 N N
57 C34 C35 C C sing 1.51 N N
58 C12 C11 C C sing 1.53 N N
59 C58 C59 C C sing 1.53 N N
60 C35 C36 C C sing 1.53 N N
61 C11 C10 C C sing 1.53 N N
62 C59 C60 C C sing 1.53 N N
63 C36 C37 C C sing 1.53 N N
64 C60 C61 C C sing 1.53 N N
65 C10 C9 C C sing 1.53 N N
66 C37 C38 C C sing 1.53 N N
67 C61 C62 C C sing 1.53 N N
68 C9 C8 C C sing 1.53 N N
69 C38 C39 C C sing 1.53 N N
70 C62 C63 C C sing 1.53 N N
71 C8 C7 C C sing 1.53 N N
72 C63 C64 C C sing 1.53 N N
73 C65 C64 C C sing 1.53 N N
74 C65 C66 C C sing 1.53 N N
75 C7 H2 C H sing 1.09 N N
76 C7 H1 C H sing 1.09 N N
77 O4 H39 O H sing 0.97 N N
78 C11 H4 C H sing 1.09 N N
79 C11 H5 C H sing 1.09 N N
80 C10 H7 C H sing 1.09 N N
81 C10 H6 C H sing 1.09 N N
82 C12 H8 C H sing 1.09 N N
83 C12 H9 C H sing 1.09 N N
84 C9 H10 C H sing 1.09 N N
85 C9 H11 C H sing 1.09 N N
86 C8 H12 C H sing 1.09 N N
87 C8 H13 C H sing 1.09 N N
88 C13 H15 C H sing 1.09 N N
89 C13 H14 C H sing 1.09 N N
90 C14 H17 C H sing 1.09 N N
91 C14 H16 C H sing 1.09 N N
92 C16 H18 C H sing 1.09 N N
93 C16 H19 C H sing 1.09 N N
94 O5 H41 O H sing 0.97 N N
95 C17 H20 C H sing 1.09 N N
96 C18 H36 C H sing 1.09 N N
97 C19 H37 C H sing 1.09 N N
98 C20 H38 C H sing 1.09 N N
99 C21 H40 C H sing 1.09 N N
100 C22 H42 C H sing 1.09 N N
101 C23 H44 C H sing 1.09 N N
102 C24 H45 C H sing 1.09 N N
103 C25 H46 C H sing 1.09 N N
104 C26 H48 C H sing 1.09 N N
105 C26 H47 C H sing 1.09 N N
106 C27 H50 C H sing 1.09 N N
107 C28 H52 C H sing 1.09 N N
108 C29 H54 C H sing 1.09 N N
109 C30 H56 C H sing 1.09 N N
110 C31 H59 C H sing 1.09 N N
111 C31 H58 C H sing 1.09 N N
112 C32 H C H sing 1.09 N N
113 C33 H61 C H sing 1.09 N N
114 C33 H60 C H sing 1.09 N N
115 C35 H63 C H sing 1.09 N N
116 C35 H62 C H sing 1.09 N N
117 C36 H65 C H sing 1.09 N N
118 C36 H64 C H sing 1.09 N N
119 C37 H67 C H sing 1.09 N N
120 C37 H66 C H sing 1.09 N N
121 C38 H68 C H sing 1.09 N N
122 C38 H69 C H sing 1.09 N N
123 C39 H21 C H sing 1.09 N N
124 C39 H70 C H sing 1.09 N N
125 C57 H105 C H sing 1.09 N N
126 C57 H104 C H sing 1.09 N N
127 C58 H107 C H sing 1.09 N N
128 C58 H106 C H sing 1.09 N N
129 C59 H108 C H sing 1.09 N N
130 C59 H109 C H sing 1.09 N N
131 C60 H111 C H sing 1.09 N N
132 C60 H110 C H sing 1.09 N N
133 C61 H112 C H sing 1.09 N N
134 C61 H113 C H sing 1.09 N N
135 C62 H114 C H sing 1.09 N N
136 C62 H115 C H sing 1.09 N N
137 C63 H116 C H sing 1.09 N N
138 C63 H117 C H sing 1.09 N N
139 C64 H119 C H sing 1.09 N N
140 C64 H118 C H sing 1.09 N N
141 C65 H121 C H sing 1.09 N N
142 C65 H120 C H sing 1.09 N N
143 C66 H123 C H sing 1.09 N N
144 C66 H124 C H sing 1.09 N N
145 C66 H122 C H sing 1.09 N N
146 C67 H125 C H sing 1.09 N N
147 C68 H127 C H sing 1.09 N N
148 C69 H22 C H sing 1.09 N N
149 O10 H51 O H sing 0.97 N N
150 O11 H53 O H sing 0.97 N N
151 O12 H55 O H sing 0.97 N N
152 O15 H57 O H sing 0.97 N N
153 O21 H126 O H sing 0.97 N N
154 O22 H23 O H sing 0.97 N N
155 O23 H24 O H sing 0.97 N N
156 O6 H43 O H sing 0.97 N N
157 O9 H49 O H sing 0.97 N N
158 C7 C1 C C sing 1.53 N N
159 C1 C2 C C sing 1.53 N N
160 C2 C3 C C sing 1.53 N N
161 C3 C4 C C sing 1.53 N N
162 C4 C5 C C sing 1.53 N N
163 C5 C6 C C sing 1.53 N N
164 C6 C40 C C sing 1.53 N N
165 C39 C41 C C sing 1.53 N N
166 C41 C42 C C sing 1.53 N N
167 C42 C43 C C sing 1.53 N N
168 C43 C44 C C sing 1.53 N N
169 C44 C45 C C sing 1.53 N N
170 C44 C46 C C sing 1.53 N N
171 C45 C47 C C sing 1.53 N N
172 C47 C48 C C sing 1.53 N N
173 C48 C49 C C sing 1.53 N N
174 C49 C50 C C sing 1.53 N N
175 C50 C51 C C sing 1.53 N N
176 C51 C52 C C sing 1.53 N N
177 C52 C53 C C sing 1.53 N N
178 C53 C54 C C sing 1.53 N N
179 C54 C55 C C sing 1.53 N N
180 C55 C70 C C sing 1.53 N N
181 C1 H3 C H sing 1.09 N N
182 C1 H25 C H sing 1.09 N N
183 C2 H26 C H sing 1.09 N N
184 C2 H27 C H sing 1.09 N N
185 C3 H28 C H sing 1.09 N N
186 C3 H29 C H sing 1.09 N N
187 C4 H30 C H sing 1.09 N N
188 C4 H31 C H sing 1.09 N N
189 C5 H32 C H sing 1.09 N N
190 C5 H33 C H sing 1.09 N N
191 C6 H34 C H sing 1.09 N N
192 C6 H35 C H sing 1.09 N N
193 C40 H71 C H sing 1.09 N N
194 C40 H72 C H sing 1.09 N N
195 C40 H73 C H sing 1.09 N N
196 C41 H74 C H sing 1.09 N N
197 C41 H75 C H sing 1.09 N N
198 C42 H76 C H sing 1.09 N N
199 C42 H77 C H sing 1.09 N N
200 C43 H78 C H sing 1.09 N N
201 C43 H79 C H sing 1.09 N N
202 C44 H80 C H sing 1.09 N N
203 C45 H81 C H sing 1.09 N N
204 C45 H82 C H sing 1.09 N N
205 C46 H83 C H sing 1.09 N N
206 C46 H84 C H sing 1.09 N N
207 C46 H85 C H sing 1.09 N N
208 C47 H86 C H sing 1.09 N N
209 C47 H87 C H sing 1.09 N N
210 C48 H88 C H sing 1.09 N N
211 C48 H89 C H sing 1.09 N N
212 C49 H90 C H sing 1.09 N N
213 C49 H91 C H sing 1.09 N N
214 C50 H92 C H sing 1.09 N N
215 C50 H93 C H sing 1.09 N N
216 C51 H94 C H sing 1.09 N N
217 C51 H95 C H sing 1.09 N N
218 C52 H96 C H sing 1.09 N N
219 C52 H97 C H sing 1.09 N N
220 C53 H98 C H sing 1.09 N N
221 C53 H99 C H sing 1.09 N N
222 C54 H100 C H sing 1.09 N N
223 C54 H101 C H sing 1.09 N N
224 C55 H102 C H sing 1.09 N N
225 C55 H103 C H sing 1.09 N N
226 C70 H128 C H sing 1.09 N N
227 C70 H129 C H sing 1.09 N N
228 C70 H130 C H sing 1.09 N N