Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : IXJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 86


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N7 C18 N C doub 1.3 N N
2 N5 C18 N C sing 1.38 N N
3 N5 C17 N C sing 1.46 N N
4 O1 C19 O C doub 1.21 N N
5 C18 N6 C N sing 1.37 N N
6 C16 C17 C C sing 1.53 N N
7 C16 C15 C C sing 1.53 N N
8 C17 C19 C C sing 1.51 N N
9 C19 O2 C O sing 1.34 N N
10 C14 C15 C C sing 1.53 N N
11 C14 C13 C C sing 1.53 N N
12 C25 C29 C C doub 1.38 N Y
13 C25 C24 C C sing 1.38 N Y
14 C13 N4 C N sing 1.47 N N
15 C29 C21 C C sing 1.38 N Y
16 C24 C23 C C doub 1.38 N Y
17 O C O C doub 1.21 N N
18 N4 C12 N C sing 1.35 N N
19 C21 C22 C C doub 1.38 N Y
20 C21 C20 C C sing 1.51 N N
21 C23 C22 C C sing 1.38 N Y
22 O3 C12 O C doub 1.21 N N
23 C12 C7 C C sing 1.51 N N
24 C C20 C C sing 1.51 N N
25 C N C N sing 1.35 N N
26 O4 C6 O C doub 1.21 N N
27 C6 N2 C N sing 1.35 N N
28 C6 C1 C C sing 1.51 N N
29 N2 C7 N C sing 1.46 N N
30 N C1 N C sing 1.47 N N
31 C7 C8 C C sing 1.53 N N
32 C1 C2 C C sing 1.53 N N
33 C8 C9 C C sing 1.53 N N
34 C2 C3 C C sing 1.53 N N
35 C3 C4 C C sing 1.53 N N
36 C9 C10 C C sing 1.53 N N
37 C4 C5 C C sing 1.53 N N
38 C5 N1 C N sing 1.47 N N
39 C10 C11 C C sing 1.53 N N
40 C11 N3 C N sing 1.47 N N
41 N1 H1 N H sing 1.01 N N
42 N1 H2 N H sing 1.01 N N
43 C7 H4 C H sing 1.09 N N
44 C8 H5 C H sing 1.09 N N
45 C8 H6 C H sing 1.09 N N
46 N2 H7 N H sing 0.97 N N
47 C9 H8 C H sing 1.09 N N
48 C9 H9 C H sing 1.09 N N
49 C1 H10 C H sing 1.09 N N
50 C5 H11 C H sing 1.09 N N
51 C5 H12 C H sing 1.09 N N
52 N3 H13 N H sing 1.01 N N
53 N3 H14 N H sing 1.01 N N
54 C4 H16 C H sing 1.09 N N
55 C4 H17 C H sing 1.09 N N
56 C3 H18 C H sing 1.09 N N
57 C3 H19 C H sing 1.09 N N
58 C2 H20 C H sing 1.09 N N
59 C2 H21 C H sing 1.09 N N
60 N4 H22 N H sing 0.97 N N
61 N H23 N H sing 0.97 N N
62 C10 H24 C H sing 1.09 N N
63 C10 H25 C H sing 1.09 N N
64 C11 H26 C H sing 1.09 N N
65 C11 H27 C H sing 1.09 N N
66 C13 H28 C H sing 1.09 N N
67 C13 H29 C H sing 1.09 N N
68 C14 H30 C H sing 1.09 N N
69 C14 H31 C H sing 1.09 N N
70 C15 H32 C H sing 1.09 N N
71 C15 H33 C H sing 1.09 N N
72 C16 H34 C H sing 1.09 N N
73 C16 H35 C H sing 1.09 N N
74 C17 H36 C H sing 1.09 N N
75 C20 H37 C H sing 1.09 N N
76 C20 H38 C H sing 1.09 N N
77 C22 H39 C H sing 1.08 N N
78 C23 H40 C H sing 1.08 N N
79 C24 H41 C H sing 1.08 N N
80 C25 H42 C H sing 1.08 N N
81 C29 H43 C H sing 1.08 N N
82 N5 H44 N H sing 0.97 N N
83 N6 H45 N H sing 0.97 N N
84 N6 H46 N H sing 0.97 N N
85 N7 H47 N H sing 0.97 N N
86 O2 H48 O H sing 0.97 N N