Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : IYI    

Bonds between two atoms of the molecule

Total Number of Bonds: 96


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 F C10 F C sing 1.4 N N
2 F2 C10 F C sing 1.4 N N
3 O3 S O S doub 1.42 N N
4 C10 F1 C F sing 1.4 N N
5 C10 S C S sing 1.81 N N
6 S N1 S N sing 1.66 N N
7 S O4 S O doub 1.42 N N
8 N1 C9 N C sing 1.46 N N
9 C9 C8 C C sing 1.53 N N
10 C8 C7 C C sing 1.53 N N
11 C7 C6 C C sing 1.53 N N
12 C6 C5 C C sing 1.53 N N
13 O2 C5 O C sing 1.43 N N
14 O2 C4 O C sing 1.43 N N
15 C4 C3 C C sing 1.53 N N
16 O1 C3 O C sing 1.43 N N
17 O1 C2 O C sing 1.43 N N
18 C1 C2 C C sing 1.53 N N
19 C1 N C N sing 1.46 N N
20 O C O C doub 1.22 N N
21 N C N C sing 1.35 N N
22 C C11 C C sing 1.48 N N
23 C11 C34 C C doub 1.4 N Y
24 C11 C12 C C sing 1.39 N Y
25 C34 C33 C C sing 1.38 N Y
26 C12 C13 C C doub 1.39 N Y
27 C33 C31 C C doub 1.39 N Y
28 C13 C31 C C sing 1.41 N Y
29 C13 C14 C C sing 1.47 N N
30 C22 C21 C C doub 1.35 N N
31 C22 C23 C C sing 1.46 N N
32 C21 C20 C C sing 1.41 N N
33 N2 C25 N C sing 1.47 N N
34 N2 C23 N C doub 1.33 N N
35 N2 C24 N C sing 1.46 N N
36 C23 C26 C C sing 1.41 N N
37 C31 C32 C C sing 1.48 N N
38 C14 C20 C C doub 1.41 N N
39 C14 C15 C C sing 1.47 N N
40 C20 C19 C C sing 1.46 N N
41 C26 C19 C C doub 1.36 N N
42 C16 C15 C C sing 1.4 N Y
43 C16 C17 C C doub 1.36 N Y
44 C19 O5 C O sing 1.35 N N
45 C15 C18 C C doub 1.41 N Y
46 C17 C28 C C sing 1.4 N Y
47 O5 C18 O C sing 1.35 N N
48 C18 C27 C C sing 1.39 N Y
49 C28 C27 C C doub 1.39 N Y
50 C28 N3 C N sing 1.39 N N
51 C32 O7 C O doub 1.21 N N
52 C32 O6 C O sing 1.35 N N
53 N3 C30 N C sing 1.46 N N
54 N3 C29 N C sing 1.47 N N
55 N1 H1 N H sing 0.97 N N
56 C7 H2 C H sing 1.09 N N
57 C7 H3 C H sing 1.09 N N
58 C8 H4 C H sing 1.09 N N
59 C8 H5 C H sing 1.09 N N
60 C9 H6 C H sing 1.09 N N
61 C9 H7 C H sing 1.09 N N
62 C1 H8 C H sing 1.09 N N
63 C1 H9 C H sing 1.09 N N
64 C5 H10 C H sing 1.09 N N
65 C5 H11 C H sing 1.09 N N
66 C6 H12 C H sing 1.09 N N
67 C6 H13 C H sing 1.09 N N
68 C4 H14 C H sing 1.09 N N
69 C4 H15 C H sing 1.09 N N
70 C3 H16 C H sing 1.09 N N
71 C3 H17 C H sing 1.09 N N
72 C2 H18 C H sing 1.09 N N
73 C2 H19 C H sing 1.09 N N
74 N H20 N H sing 0.97 N N
75 C12 H21 C H sing 1.08 N N
76 C16 H22 C H sing 1.08 N N
77 C17 H23 C H sing 1.08 N N
78 C21 H24 C H sing 1.08 N N
79 C22 H25 C H sing 1.08 N N
80 C24 H26 C H sing 1.09 N N
81 C24 H27 C H sing 1.09 N N
82 C24 H28 C H sing 1.09 N N
83 C25 H29 C H sing 1.09 N N
84 C25 H30 C H sing 1.09 N N
85 C25 H31 C H sing 1.09 N N
86 C26 H32 C H sing 1.08 N N
87 C27 H33 C H sing 1.08 N N
88 C29 H34 C H sing 1.09 N N
89 C29 H35 C H sing 1.09 N N
90 C29 H36 C H sing 1.09 N N
91 C30 H37 C H sing 1.09 N N
92 C30 H38 C H sing 1.09 N N
93 C30 H39 C H sing 1.09 N N
94 C33 H40 C H sing 1.08 N N
95 C34 H41 C H sing 1.08 N N
96 O6 H42 O H sing 0.97 N N