Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : J2C    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O11 C08 O C doub 1.21 N N
2 C09 C08 C C sing 1.52 N N
3 C09 S10 C S sing 1.84 N N
4 C08 N07 C N sing 1.33 N N
5 C05 C06 C C sing 1.54 N N
6 C05 C04 C C sing 1.52 N N
7 C06 N01 C N sing 1.47 N N
8 N07 C12 N C sing 1.47 N N
9 N07 C04 N C sing 1.46 N N
10 C12 C13 C C sing 1.51 N N
11 S10 C04 S C sing 1.83 N N
12 C04 C03 C C sing 1.52 N N
13 O20 C18 O C doub 1.21 N N
14 C14 C13 C C doub 1.34 N Y
15 C14 C15 C C sing 1.41 N Y
16 C13 O17 C O sing 1.34 N Y
17 N01 C18 N C sing 1.35 N N
18 N01 C02 N C sing 1.47 N N
19 C18 C19 C C sing 1.51 N N
20 C03 C02 C C sing 1.53 N N
21 C15 C16 C C doub 1.34 N Y
22 O17 C16 O C sing 1.34 N Y
23 C12 H1 C H sing 1.09 N N
24 C12 H2 C H sing 1.09 N N
25 C02 H3 C H sing 1.09 N N
26 C02 H4 C H sing 1.09 N N
27 C03 H5 C H sing 1.09 N N
28 C03 H6 C H sing 1.09 N N
29 C05 H7 C H sing 1.09 N N
30 C05 H8 C H sing 1.09 N N
31 C06 H9 C H sing 1.09 N N
32 C06 H10 C H sing 1.09 N N
33 C09 H11 C H sing 1.09 N N
34 C09 H12 C H sing 1.09 N N
35 C14 H13 C H sing 1.08 N N
36 C15 H14 C H sing 1.08 N N
37 C16 H15 C H sing 1.08 N N
38 C19 H16 C H sing 1.09 N N
39 C19 H17 C H sing 1.09 N N
40 C19 CL1 C CL sing 1.8 N N