Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : J2F    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C13 C14 C C doub 1.38 N Y
2 C13 C12 C C sing 1.38 N Y
3 C14 C15 C C sing 1.38 N Y
4 C12 C11 C C doub 1.38 N Y
5 C15 N2 C N sing 1.48 N N
6 C15 C10 C C doub 1.38 N Y
7 C11 C10 C C sing 1.38 N Y
8 O2 N2 O N doub 1.22 N N
9 N2 O3 N O sing 1.22 N N
10 C10 C9 C C sing 1.51 N N
11 C9 O1 C O sing 1.43 N N
12 O1 C6 O C sing 1.36 N N
13 C6 C5 C C doub 1.39 N Y
14 C6 C7 C C sing 1.39 N Y
15 C5 C4 C C sing 1.38 N Y
16 C7 C8 C C doub 1.38 N Y
17 C4 C3 C C doub 1.38 N Y
18 C8 C3 C C sing 1.38 N Y
19 C3 C2 C C sing 1.51 N N
20 C O C O doub 1.21 N N
21 C CA C C sing 1.51 N N
22 CA C2 C C sing 1.53 N N
23 CA N C N sing 1.47 N N
24 N H N H sing 1.01 N N
25 N H2 N H sing 1.01 N N
26 C4 H4 C H sing 1.08 N N
27 C5 H5 C H sing 1.08 N N
28 C7 H6 C H sing 1.08 N N
29 C8 H7 C H sing 1.08 N N
30 C13 H8 C H sing 1.08 N N
31 CA HA C H sing 1.09 N N
32 C11 H10 C H sing 1.08 N N
33 C12 H11 C H sing 1.08 N N
34 C14 H12 C H sing 1.08 N N
35 C2 H14 C H sing 1.09 N N
36 C2 H15 C H sing 1.09 N N
37 C9 H16 C H sing 1.09 N N
38 C9 H17 C H sing 1.09 N N
39 C OXT C O sing 1.34 N N
40 OXT HXT O H sing 0.97 N N