Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : J2G    

Bonds between two atoms of the molecule

Total Number of Bonds: 54


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 OAY CAV O C doub 1.22 N N
2 CAV OAW C O sing 1.35 N N
3 CAV CAN C C sing 1.48 N N
4 CAM CAN C C doub 1.4 N Y
5 CAM CAD C C sing 1.38 N Y
6 CAN CAO C C sing 1.4 N Y
7 CAD CAE C C doub 1.39 N Y
8 CAO CAF C C doub 1.38 N Y
9 CAE CAF C C sing 1.39 N Y
10 CAE OAB C O sing 1.36 N N
11 CAA OAB C O sing 1.43 N N
12 CAF SAG C S sing 1.76 N N
13 OAP SAG O S doub 1.42 N N
14 SAG OAC S O doub 1.42 N N
15 SAG NAH S N sing 1.66 N N
16 CAJ CAK C C doub 1.38 N Y
17 CAJ CAI C C sing 1.39 N Y
18 NAH CAI N C sing 1.4 N N
19 CAK CAS C C sing 1.38 N Y
20 CAI CAQ C C doub 1.39 N Y
21 CAS CAT C C sing 1.51 N N
22 CAS CAR C C doub 1.38 N Y
23 FAL CAT F C sing 1.4 N N
24 CAQ CAR C C sing 1.39 N Y
25 CAQ NAZ C N sing 1.4 N N
26 FAU CAT F C sing 1.4 N N
27 CAT FAX C F sing 1.4 N N
28 NAZ CBA N C sing 1.47 N N
29 NAZ CBC N C sing 1.47 N N
30 CBA CBB C C sing 1.53 N N
31 CBC CBD C C sing 1.53 N N
32 CBB CBE C C sing 1.53 N N
33 CBE CBD C C sing 1.53 N N
34 CAA HAB C H sing 1.09 N N
35 CAA HAA C H sing 1.09 N N
36 CAA HAC C H sing 1.09 N N
37 CAD HAD C H sing 1.08 N N
38 CAJ HAJ C H sing 1.08 N N
39 CAK HAK C H sing 1.08 N N
40 CAM HAM C H sing 1.08 N N
41 CAO HAO C H sing 1.08 N N
42 CAR HAR C H sing 1.08 N N
43 CBA HBA C H sing 1.09 N N
44 CBA HBB C H sing 1.09 N N
45 CBB HBC C H sing 1.09 N N
46 CBB HBD C H sing 1.09 N N
47 CBC HBF C H sing 1.09 N N
48 CBC HBE C H sing 1.09 N N
49 CBD HBG C H sing 1.09 N N
50 CBD HBH C H sing 1.09 N N
51 CBE HBJ C H sing 1.09 N N
52 CBE HBI C H sing 1.09 N N
53 NAH HAH N H sing 0.97 N N
54 OAW H1 O H sing 0.97 N N