Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : J6Q    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O13 C12 O C doub 1.21 N N
2 C20 N19 C N sing 1.46 N N
3 O14 C12 O C sing 1.34 N N
4 C12 C11 C C sing 1.51 N N
5 C17 C18 C C doub 1.39 N Y
6 C17 C16 C C sing 1.38 N Y
7 N19 C18 N C sing 1.37 N Y
8 N19 N21 N N sing 1.4 N Y
9 C18 C23 C C sing 1.41 N Y
10 C16 C15 C C doub 1.39 N Y
11 N21 N22 N N doub 1.29 N Y
12 C23 N22 C N sing 1.35 N Y
13 C23 C24 C C doub 1.4 N Y
14 C11 C9 C C sing 1.53 N N
15 C15 C24 C C sing 1.36 N Y
16 C15 C9 C C sing 1.51 N N
17 C9 C4 C C sing 1.51 N N
18 C4 C3 C C doub 1.38 N Y
19 C4 C5 C C sing 1.38 N Y
20 C3 C2 C C sing 1.38 N Y
21 C5 C6 C C doub 1.38 N Y
22 C2 C1 C C sing 1.51 N N
23 C2 C7 C C doub 1.38 N Y
24 C6 C7 C C sing 1.38 N Y
25 C7 CL8 C CL sing 1.74 N N
26 C1 H27 C H sing 1.09 N N
27 C1 H25 C H sing 1.09 N N
28 C1 H26 C H sing 1.09 N N
29 C3 H28 C H sing 1.08 N N
30 C5 H29 C H sing 1.08 N N
31 C6 H30 C H sing 1.08 N N
32 C11 H32 C H sing 1.09 N N
33 C11 H31 C H sing 1.09 N N
34 C16 H33 C H sing 1.08 N N
35 C24 H38 C H sing 1.08 N N
36 C9 H10 C H sing 1.09 N N
37 O14 H1 O H sing 0.97 N N
38 C17 H34 C H sing 1.08 N N
39 C20 H36 C H sing 1.09 N N
40 C20 H35 C H sing 1.09 N N
41 C20 H37 C H sing 1.09 N N