Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : JE1    

Bonds between two atoms of the molecule

Total Number of Bonds: 49


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C10 C7 C C sing 1.53 N N
2 C9 N3 C N sing 1.47 N N
3 C9 C8 C C sing 1.53 N N
4 N3 C5 N C sing 1.47 N N
5 N3 C4 N C sing 1.37 N N
6 C8 C7 C C sing 1.53 N N
7 C5 C6 C C sing 1.53 N N
8 C7 C6 C C sing 1.53 N N
9 C7 C11 C C sing 1.53 N N
10 N1 C4 N C sing 1.36 N N
11 N1 C1 N C sing 1.35 N N
12 C4 N2 C N doub 1.32 N N
13 C14 C13 C C doub 1.38 N Y
14 C14 C15 C C sing 1.38 N Y
15 C11 N4 C N sing 1.47 N N
16 O1 C1 O C doub 1.22 N N
17 C1 C2 C C sing 1.41 N N
18 N2 C3 N C sing 1.33 N N
19 C13 C12 C C sing 1.39 N Y
20 C15 N5 C N doub 1.32 N Y
21 C3 C2 C C doub 1.38 N N
22 C2 S1 C S sing 1.76 N N
23 N5 C16 N C sing 1.32 N Y
24 C12 C16 C C doub 1.39 N Y
25 C12 S1 C S sing 1.76 N N
26 C16 C17 C C sing 1.51 N N
27 C17 F3 C F sing 1.4 N N
28 C17 F1 C F sing 1.4 N N
29 C17 F2 C F sing 1.4 N N
30 C3 H2 C H sing 1.08 N N
31 C11 H3 C H sing 1.09 N N
32 C11 H4 C H sing 1.09 N N
33 C13 H5 C H sing 1.08 N N
34 C14 H6 C H sing 1.08 N N
35 C15 H7 C H sing 1.08 N N
36 C10 H8 C H sing 1.09 N N
37 C10 H9 C H sing 1.09 N N
38 C10 H10 C H sing 1.09 N N
39 C5 H11 C H sing 1.09 N N
40 C5 H12 C H sing 1.09 N N
41 C6 H13 C H sing 1.09 N N
42 C6 H14 C H sing 1.09 N N
43 C8 H15 C H sing 1.09 N N
44 C8 H16 C H sing 1.09 N N
45 C9 H17 C H sing 1.09 N N
46 C9 H18 C H sing 1.09 N N
47 N4 H19 N H sing 1.01 N N
48 N4 H20 N H sing 1.01 N N
49 N1 H1 N H sing 0.97 N N