Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : JN5    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1V C1W C C doub 1.39 N Y
2 C1W C1X C C sing 1.39 N Y
3 C1W H1W C H sing 1.08 N N
4 C1Y C1X C C doub 1.38 N Y
5 C1X H1X C H sing 1.08 N N
6 N1Z C1Y N C sing 1.32 N Y
7 C1Y H1Y C H sing 1.08 N N
8 C2A N1Z C N doub 1.32 N Y
9 C2A C1V C C sing 1.38 N Y
10 C2A H2A C H sing 1.08 N N
11 C1U C1V C C sing 1.51 N N
12 C1U C1T C C sing 1.53 N N
13 C1U H1U C H sing 1.09 N N
14 C1U H1UA C H sing 1.09 N N
15 N1S C1T N C sing 1.47 N N
16 C1T H1T C H sing 1.09 N N
17 C1T H1TA C H sing 1.09 N N
18 N1S C2 N C sing 1.38 N N
19 N1S HN1S N H sing 0.97 N N
20 N1 C2 N C doub 1.32 N Y
21 C2 N3 C N sing 1.33 N Y
22 N3 C4 N C doub 1.32 N Y
23 N1 C6 N C sing 1.32 N Y
24 C6 C5 C C doub 1.39 N Y
25 C6 H6 C H sing 1.08 N N
26 C5 C4 C C sing 1.39 N Y
27 C5 H5 C H sing 1.08 N N
28 C4 C1J C C sing 1.51 N N
29 C1J C1I C C sing 1.51 N N
30 C1J C1K C C sing 1.47 N N
31 C1J H1J C H sing 1.09 N N
32 C1K N1L C N trip 1.14 N N
33 S1H C1I S C sing 1.71 N Y
34 C1I N1G C N doub 1.28 N Y
35 N1G C1E N C sing 1.35 N Y
36 C1F C1E C C doub 1.4 N Y
37 C1E C1C C C sing 1.41 N Y
38 C1C C1A C C doub 1.36 N Y
39 C1C H1C C H sing 1.08 N N
40 C1B C1A C C sing 1.39 N Y
41 C1A H1A C H sing 1.08 N N
42 C1D C1B C C doub 1.38 N Y
43 C1B H1B C H sing 1.08 N N
44 C1F C1D C C sing 1.39 N Y
45 C1D H1D C H sing 1.08 N N
46 S1H C1F S C sing 1.76 N Y