Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : JPO    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N C N C sing 1.47 N N
2 O C1 O C doub 1.21 N N
3 C C1 C C sing 1.51 N N
4 C1 N1 C N sing 1.35 N N
5 O2 S O S doub 1.42 N N
6 O1 S O S doub 1.42 N N
7 N1 S N S sing 1.66 N N
8 S O3 S O sing 1.52 N N
9 N4 C7 N C sing 1.38 N N
10 N3 C6 N C sing 1.36 N Y
11 N3 C5 N C doub 1.3 N Y
12 C7 C6 C C doub 1.4 N Y
13 C7 N5 C N sing 1.33 N Y
14 O3 C2 O C sing 1.43 N N
15 C6 C9 C C sing 1.41 N Y
16 C5 N2 C N sing 1.36 N Y
17 N5 C8 N C doub 1.32 N Y
18 C2 C3 C C sing 1.53 N N
19 C9 N2 C N sing 1.37 N Y
20 C9 N6 C N doub 1.33 N Y
21 N2 C4 N C sing 1.46 N N
22 C8 N6 C N sing 1.32 N Y
23 C8 CL C CL sing 1.74 N N
24 O4 C3 O C sing 1.44 N N
25 O4 C4 O C sing 1.44 N N
26 C3 C11 C C sing 1.54 N N
27 C11 C10 C C sing 1.54 N N
28 C11 O6 C O sing 1.43 N N
29 C4 C10 C C sing 1.54 N N
30 C10 O5 C O sing 1.43 N N
31 C2 H1 C H sing 1.09 N N
32 C2 H2 C H sing 1.09 N N
33 C3 H3 C H sing 1.09 N N
34 C4 H4 C H sing 1.09 N N
35 C5 H5 C H sing 1.08 N N
36 O5 H6 O H sing 0.97 N N
37 O6 H7 O H sing 0.97 N N
38 N4 H8 N H sing 0.97 N N
39 N4 H9 N H sing 0.97 N N
40 C10 H10 C H sing 1.09 N N
41 C11 H11 C H sing 1.09 N N
42 N1 H12 N H sing 0.97 N N
43 C H13 C H sing 1.09 N N
44 C H14 C H sing 1.09 N N
45 N H15 N H sing 1.01 N N
46 N H16 N H sing 1.01 N N