Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : JY6    

Bonds between two atoms of the molecule

Total Number of Bonds: 33


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C11 C12 C C doub 1.39 N Y
2 C11 C10 C C sing 1.38 N Y
3 C12 C13 C C sing 1.38 N Y
4 C10 C9 C C doub 1.4 N Y
5 C13 C14 C C doub 1.39 N Y
6 C9 C14 C C sing 1.4 N Y
7 C9 C8 C C sing 1.47 N N
8 C14 N C N sing 1.39 N N
9 C8 O C O doub 1.22 N N
10 C8 C7 C C sing 1.48 N N
11 N C7 N C sing 1.38 N N
12 C7 C6 C C doub 1.38 Z N
13 C6 C4 C C sing 1.48 N N
14 C6 C15 C C sing 1.48 N N
15 C5 C4 C C doub 1.39 N Y
16 C5 C C C sing 1.38 N Y
17 C4 C3 C C sing 1.4 N Y
18 O1 C15 O C doub 1.22 N N
19 C15 N1 C N sing 1.34 N N
20 C C1 C C doub 1.38 N Y
21 C3 N1 C N sing 1.39 N N
22 C3 C2 C C doub 1.39 N Y
23 C1 C2 C C sing 1.38 N Y
24 N1 H9 N H sing 0.97 N N
25 C1 H1 C H sing 1.08 N N
26 C5 H3 C H sing 1.08 N N
27 C2 H2 C H sing 1.08 N N
28 N H8 N H sing 0.97 N N
29 C H C H sing 1.08 N N
30 C10 H4 C H sing 1.08 N N
31 C11 H5 C H sing 1.08 N N
32 C12 H6 C H sing 1.08 N N
33 C13 H7 C H sing 1.08 N N