Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : K5G    

Bonds between two atoms of the molecule

Total Number of Bonds: 37


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 BR1 C02 BR C sing 1.89 N N
2 C02 C03 C C doub 1.38 N Y
3 C02 C20 C C sing 1.38 N Y
4 C03 C04 C C sing 1.39 N Y
5 C20 C19 C C doub 1.38 N Y
6 O10 C09 O C doub 1.21 N N
7 C04 O05 C O sing 1.36 N N
8 C04 C18 C C doub 1.39 N Y
9 O05 C06 O C sing 1.43 N N
10 C19 C18 C C sing 1.38 N Y
11 C07 C06 C C sing 1.53 N N
12 C07 C08 C C sing 1.53 N N
13 C09 C08 C C sing 1.51 N N
14 C09 N11 C N sing 1.35 N N
15 C12 N11 C N sing 1.46 N N
16 C12 C16 C C sing 1.5 N N
17 C12 C13 C C sing 1.53 N N
18 O17 C16 O C doub 1.21 N N
19 C16 S15 C S sing 1.72 N N
20 C13 C14 C C sing 1.54 N N
21 S15 C14 S C sing 1.82 N N
22 C03 H1 C H sing 1.08 N N
23 C18 H2 C H sing 1.08 N N
24 C19 H3 C H sing 1.08 N N
25 C20 H4 C H sing 1.08 N N
26 C06 H5 C H sing 1.09 N N
27 C06 H6 C H sing 1.09 N N
28 C07 H7 C H sing 1.09 N N
29 C08 H8 C H sing 1.09 N N
30 N11 H9 N H sing 0.97 N N
31 C12 H10 C H sing 1.09 N N
32 C13 H11 C H sing 1.09 N N
33 C13 H12 C H sing 1.09 N N
34 C14 H13 C H sing 1.09 N N
35 C14 H14 C H sing 1.09 N N
36 C07 H15 C H sing 1.09 N N
37 C08 H16 C H sing 1.09 N N