Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : K60    

Bonds between two atoms of the molecule

Total Number of Bonds: 85


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O10 S8 O S doub 1.42 N N
2 S8 O9 S O doub 1.42 N N
3 S8 C5 S C sing 1.76 N N
4 S8 N11 S N sing 1.66 N N
5 C5 C4 C C doub 1.38 N Y
6 C5 C6 C C sing 1.38 N Y
7 C4 C3 C C sing 1.39 N Y
8 C3 C2 C C doub 1.39 N Y
9 C3 O29 C O sing 1.37 N N
10 C2 O19 C O sing 1.37 N N
11 C2 C7 C C sing 1.39 N Y
12 O19 C18 O C sing 1.44 N N
13 C18 O29 C O sing 1.44 N N
14 C7 C6 C C doub 1.38 N Y
15 N11 C12 N C sing 1.46 N N
16 N11 C16 N C sing 1.47 N N
17 C12 C13 C C sing 1.53 N N
18 C13 C14 C C sing 1.53 N N
19 C13 C15 C C sing 1.53 N N
20 C16 C17 C C sing 1.53 N N
21 C17 O18 C O sing 1.43 N N
22 C17 C19 C C sing 1.53 N N
23 C19 C32 C C sing 1.53 N N
24 C19 N20 C N sing 1.47 N N
25 C32 C38 C C sing 1.51 N N
26 C38 C33 C C doub 1.38 N Y
27 C38 C37 C C sing 1.38 N Y
28 C33 C34 C C sing 1.38 N Y
29 C34 C35 C C doub 1.38 N Y
30 C35 C36 C C sing 1.38 N Y
31 C36 C37 C C doub 1.38 N Y
32 N20 C21 N C sing 1.35 N N
33 C21 O22 C O doub 1.21 N N
34 C21 C29 C C sing 1.51 N N
35 C29 O28 C O sing 1.46 N N
36 C29 C25 C C sing 1.54 N N
37 O28 C26 O C sing 1.34 N N
38 C26 O27 C O doub 1.21 N N
39 C26 N24 C N sing 1.34 N N
40 C25 N24 C N sing 1.47 N N
41 N24 C43 N C sing 1.4 N N
42 C43 C44 C C doub 1.39 N Y
43 C43 C42 C C sing 1.39 N Y
44 C44 C45 C C sing 1.38 N Y
45 C45 C40 C C doub 1.38 N Y
46 C40 C41 C C sing 1.38 N Y
47 C42 C41 C C doub 1.38 N Y
48 C41 C46 C C sing 1.51 N N
49 C46 F1 C F sing 1.4 N N
50 C46 F2 C F sing 1.4 N N
51 C46 F3 C F sing 1.4 N N
52 C4 H4 C H sing 1.08 N N
53 C18 H18 C H sing 1.09 N N
54 C18 H18A C H sing 1.09 N N
55 C7 H7 C H sing 1.08 N N
56 C6 H6 C H sing 1.08 N N
57 C12 H12 C H sing 1.09 N N
58 C12 H12A C H sing 1.09 N N
59 C13 H13 C H sing 1.09 N N
60 C14 H14 C H sing 1.09 N N
61 C14 H14A C H sing 1.09 N N
62 C14 H14B C H sing 1.09 N N
63 C15 H15 C H sing 1.09 N N
64 C15 H15A C H sing 1.09 N N
65 C15 H15B C H sing 1.09 N N
66 C16 H16 C H sing 1.09 N N
67 C16 H16A C H sing 1.09 N N
68 C17 H17 C H sing 1.09 N N
69 O18 HO18 O H sing 0.97 N N
70 C19 H19 C H sing 1.09 N N
71 C32 H32 C H sing 1.09 N N
72 C32 H32A C H sing 1.09 N N
73 C33 H33 C H sing 1.08 N N
74 C34 H34 C H sing 1.08 N N
75 C35 H35 C H sing 1.08 N N
76 C36 H36 C H sing 1.08 N N
77 C37 H37 C H sing 1.08 N N
78 N20 HN20 N H sing 0.97 N N
79 C29 H29 C H sing 1.09 N N
80 C25 H25 C H sing 1.09 N N
81 C25 H25A C H sing 1.09 N N
82 C44 H44 C H sing 1.08 N N
83 C45 H45 C H sing 1.08 N N
84 C40 H40 C H sing 1.08 N N
85 C42 H42 C H sing 1.08 N N