Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : L5J    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O20 C18 O C doub 1.21 N N
2 O19 C18 O C sing 1.34 N N
3 C18 C17 C C sing 1.51 N N
4 C17 C02 C C sing 1.51 N N
5 C02 C01 C C doub 1.38 N Y
6 C02 C03 C C sing 1.38 N Y
7 C01 C06 C C sing 1.38 N Y
8 C03 C04 C C doub 1.38 N Y
9 C06 C05 C C doub 1.38 N Y
10 C04 C05 C C sing 1.38 N Y
11 C05 C07 C C sing 1.51 N N
12 O15 C09 O C doub 1.21 N N
13 C07 C10 C C sing 1.53 N N
14 C09 O16 C O sing 1.34 N N
15 C09 C08 C C sing 1.51 N N
16 C12 C10 C C sing 1.54 N N
17 C12 C13 C C sing 1.55 N N
18 C10 C11 C C sing 1.54 N N
19 C11 C08 C C sing 1.53 N N
20 C11 C14 C C sing 1.54 N N
21 C14 C13 C C sing 1.55 N N
22 C10 H1 C H sing 1.09 N N
23 C13 H2 C H sing 1.09 N N
24 C13 H3 C H sing 1.09 N N
25 C11 H4 C H sing 1.09 N N
26 C12 H5 C H sing 1.09 N N
27 C12 H6 C H sing 1.09 N N
28 C14 H7 C H sing 1.09 N N
29 C14 H8 C H sing 1.09 N N
30 C01 H9 C H sing 1.08 N N
31 C03 H10 C H sing 1.08 N N
32 C04 H11 C H sing 1.08 N N
33 C06 H12 C H sing 1.08 N N
34 C07 H13 C H sing 1.09 N N
35 C07 H14 C H sing 1.09 N N
36 C08 H15 C H sing 1.09 N N
37 C08 H16 C H sing 1.09 N N
38 C17 H17 C H sing 1.09 N N
39 C17 H18 C H sing 1.09 N N
40 O16 H19 O H sing 0.97 N N
41 O19 H20 O H sing 0.97 N N