Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : L9Q    

Bonds between two atoms of the molecule

Total Number of Bonds: 130


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C5 N C N sing 1.47 N N
2 N HN N H sing 1.01 N N
3 N HNA N H sing 1.01 N N
4 O3P P O P sing 1.61 N N
5 O1P P O P doub 1.48 N N
6 P O2P P O sing 1.61 N N
7 P O4P P O sing 1.61 N N
8 C2 C1 C C sing 1.53 N N
9 O3P C1 O C sing 1.43 N N
10 C1 H1 C H sing 1.09 N N
11 C1 H1A C H sing 1.09 N N
12 C3 C2 C C sing 1.53 N N
13 C2 O2 C O sing 1.45 N N
14 C2 H2 C H sing 1.09 N N
15 C31 O2 C O sing 1.34 N N
16 O3 C3 O C sing 1.45 N N
17 C3 H3 C H sing 1.09 N N
18 C3 H3A C H sing 1.09 N N
19 C11 O3 C O sing 1.34 N N
20 O4P C4 O C sing 1.43 N N
21 C4 C5 C C sing 1.53 N N
22 C4 H4 C H sing 1.09 N N
23 C4 H4A C H sing 1.09 N N
24 C5 H5 C H sing 1.09 N N
25 C5 H5A C H sing 1.09 N N
26 C12 C11 C C sing 1.51 N N
27 O11 C11 O C doub 1.21 N N
28 C12 C13 C C sing 1.53 N N
29 C12 H12 C H sing 1.09 N N
30 C12 H12A C H sing 1.09 N N
31 C14 C13 C C sing 1.53 N N
32 C13 H13 C H sing 1.09 N N
33 C13 H13A C H sing 1.09 N N
34 C15 C14 C C sing 1.53 N N
35 C14 H14 C H sing 1.09 N N
36 C14 H14A C H sing 1.09 N N
37 C16 C15 C C sing 1.53 N N
38 C15 H15 C H sing 1.09 N N
39 C15 H15A C H sing 1.09 N N
40 C16 C17 C C sing 1.53 N N
41 C16 H16 C H sing 1.09 N N
42 C16 H16A C H sing 1.09 N N
43 C17 C18 C C sing 1.53 N N
44 C17 H17 C H sing 1.09 N N
45 C17 H17A C H sing 1.09 N N
46 C19 C18 C C sing 1.53 N N
47 C18 H18 C H sing 1.09 N N
48 C18 H18A C H sing 1.09 N N
49 C19 C20 C C sing 1.53 N N
50 C19 H19 C H sing 1.09 N N
51 C19 H19A C H sing 1.09 N N
52 C21 C20 C C sing 1.53 N N
53 C20 H20 C H sing 1.09 N N
54 C20 H20A C H sing 1.09 N N
55 C21 C22 C C sing 1.53 N N
56 C21 H21 C H sing 1.09 N N
57 C21 H21A C H sing 1.09 N N
58 C23 C22 C C sing 1.53 N N
59 C22 H22 C H sing 1.09 N N
60 C22 H22A C H sing 1.09 N N
61 C23 C24 C C sing 1.53 N N
62 C23 H23 C H sing 1.09 N N
63 C23 H23A C H sing 1.09 N N
64 C25 C24 C C sing 1.53 N N
65 C24 H24 C H sing 1.09 N N
66 C24 H24A C H sing 1.09 N N
67 C25 C26 C C sing 1.53 N N
68 C25 H25 C H sing 1.09 N N
69 C25 H25A C H sing 1.09 N N
70 C27 C26 C C sing 1.53 N N
71 C26 H26 C H sing 1.09 N N
72 C26 H26A C H sing 1.09 N N
73 C28 C27 C C sing 1.53 N N
74 C27 H27 C H sing 1.09 N N
75 C27 H27A C H sing 1.09 N N
76 C28 H28 C H sing 1.09 N N
77 C28 H28A C H sing 1.09 N N
78 C28 H28B C H sing 1.09 N N
79 O2P HO2P O H sing 0.97 N N
80 C32 C31 C C sing 1.51 N N
81 C31 O31 C O doub 1.21 N N
82 C32 C33 C C sing 1.53 N N
83 C32 H32 C H sing 1.09 N N
84 C32 H32A C H sing 1.09 N N
85 C34 C33 C C sing 1.53 N N
86 C33 H33 C H sing 1.09 N N
87 C33 H33A C H sing 1.09 N N
88 C34 C35 C C sing 1.53 N N
89 C34 H34 C H sing 1.09 N N
90 C34 H34A C H sing 1.09 N N
91 C36 C35 C C sing 1.53 N N
92 C35 H35 C H sing 1.09 N N
93 C35 H35A C H sing 1.09 N N
94 C36 C37 C C sing 1.53 N N
95 C36 H36 C H sing 1.09 N N
96 C36 H36A C H sing 1.09 N N
97 C38 C37 C C sing 1.53 N N
98 C37 H37 C H sing 1.09 N N
99 C37 H37A C H sing 1.09 N N
100 C39 C38 C C sing 1.51 Z N
101 C38 H38 C H sing 1.09 N N
102 C38 H38A C H sing 1.09 N N
103 C39 C40 C C doub 1.31 N N
104 C39 H39 C H sing 1.08 N N
105 C40 C41 C C sing 1.51 N N
106 C40 H40 C H sing 1.08 N N
107 C41 C42 C C sing 1.53 N N
108 C41 H41 C H sing 1.09 N N
109 C41 H41A C H sing 1.09 N N
110 C42 C43 C C sing 1.53 N N
111 C42 H42 C H sing 1.09 N N
112 C42 H42A C H sing 1.09 N N
113 C43 C44 C C sing 1.53 N N
114 C43 H43 C H sing 1.09 N N
115 C43 H43A C H sing 1.09 N N
116 C44 C45 C C sing 1.53 N N
117 C44 H44 C H sing 1.09 N N
118 C44 H44A C H sing 1.09 N N
119 C45 C46 C C sing 1.53 N N
120 C45 H45 C H sing 1.09 N N
121 C45 H45A C H sing 1.09 N N
122 C46 C47 C C sing 1.53 N N
123 C46 H46 C H sing 1.09 N N
124 C46 H46A C H sing 1.09 N N
125 C47 C48 C C sing 1.53 N N
126 C47 H47 C H sing 1.09 N N
127 C47 H47A C H sing 1.09 N N
128 C48 H48 C H sing 1.09 N N
129 C48 H48A C H sing 1.09 N N
130 C48 H48B C H sing 1.09 N N