Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : LUJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 98


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 NAO CAW N C sing 1.47 N N
2 OAE CAV O C sing 1.43 N N
3 CAW CAV C C sing 1.53 N N
4 CAW CAX C C sing 1.53 N N
5 NAQ CBH N C sing 1.47 N N
6 CBH CBJ C C sing 1.53 N N
7 CBH CBF C C sing 1.53 N N
8 CAV CAS C C sing 1.53 N N
9 OAJ CBJ O C sing 1.43 N N
10 CBJ CBL C C sing 1.53 N N
11 O2' C2' O C sing 1.43 N N
12 CAX CAU C C sing 1.53 N N
13 O3' CBF O C sing 1.43 N N
14 O3' C3' O C sing 1.43 N N
15 CBF OAG C O sing 1.43 N N
16 CBL OAL C O sing 1.43 N N
17 CBL CBM C C sing 1.53 N N
18 CAS O1' C O sing 1.43 N N
19 CAS CAT C C sing 1.53 N N
20 C2' C1' C C sing 1.55 N N
21 C2' C3' C C sing 1.54 N N
22 O1' C1' O C sing 1.43 N N
23 C1' O4' C O sing 1.44 N N
24 CAU CAT C C sing 1.53 N N
25 CAU NAN C N sing 1.47 N N
26 C3' C4' C C sing 1.54 N N
27 CAT OAB C O sing 1.43 N N
28 OAG CBM O C sing 1.43 N N
29 CBM CBO C C sing 1.53 N N
30 O4' C4' O C sing 1.44 N N
31 C4' C5' C C sing 1.53 N N
32 OAB CBC O C sing 1.43 N N
33 CBO NAR C N sing 1.47 N N
34 C5' O5' C O sing 1.43 N N
35 CBC OAF C O sing 1.43 N N
36 CBC CBD C C sing 1.53 N N
37 OAF CBI O C sing 1.43 N N
38 OAM CBN O C sing 1.43 N N
39 CBI CBN C C sing 1.53 N N
40 CBI CBG C C sing 1.53 N N
41 NAP CBD N C sing 1.47 N N
42 CBD CBE C C sing 1.53 N N
43 CBE CBG C C sing 1.53 N N
44 CBE OAI C O sing 1.43 N N
45 CBG CBP C C sing 1.53 N N
46 CBP CBQ C C sing 1.53 N N
47 CBQ CBR C C sing 1.53 N N
48 CBR H1 C H sing 1.09 N N
49 CBR H2 C H sing 1.09 N N
50 CBR H3 C H sing 1.09 N N
51 CBQ H4 C H sing 1.09 N N
52 CBQ H5 C H sing 1.09 N N
53 CBP H6 C H sing 1.09 N N
54 CBP H7 C H sing 1.09 N N
55 CBG H8 C H sing 1.09 N N
56 CBI H9 C H sing 1.09 N N
57 CBN H10 C H sing 1.09 N N
58 CBN H11 C H sing 1.09 N N
59 OAM H12 O H sing 0.97 N N
60 CBE H13 C H sing 1.09 N N
61 OAI H14 O H sing 0.97 N N
62 CBD H15 C H sing 1.09 N N
63 NAP H16 N H sing 1.01 N N
64 NAP H17 N H sing 1.01 N N
65 CBC H19 C H sing 1.09 N N
66 CAT H20 C H sing 1.09 N N
67 CAU H21 C H sing 1.09 N N
68 NAN H22 N H sing 1.01 N N
69 NAN H23 N H sing 1.01 N N
70 CAX H25 C H sing 1.09 N N
71 CAX H26 C H sing 1.09 N N
72 CAW H27 C H sing 1.09 N N
73 NAO H28 N H sing 1.01 N N
74 NAO H29 N H sing 1.01 N N
75 CAV H31 C H sing 1.09 N N
76 OAE H32 O H sing 0.97 N N
77 CAS H33 C H sing 1.09 N N
78 C1' H34 C H sing 1.09 N N
79 C2' H35 C H sing 1.09 N N
80 O2' H36 O H sing 0.97 N N
81 C4' H37 C H sing 1.09 N N
82 C5' H38 C H sing 1.09 N N
83 C5' H39 C H sing 1.09 N N
84 O5' H40 O H sing 0.97 N N
85 C3' H41 C H sing 1.09 N N
86 CBF H42 C H sing 1.09 N N
87 CBM H43 C H sing 1.09 N N
88 CBO H44 C H sing 1.09 N N
89 CBO H45 C H sing 1.09 N N
90 NAR H46 N H sing 1.01 N N
91 NAR H47 N H sing 1.01 N N
92 CBL H49 C H sing 1.09 N N
93 OAL H50 O H sing 0.97 N N
94 CBJ H51 C H sing 1.09 N N
95 OAJ H52 O H sing 0.97 N N
96 CBH H53 C H sing 1.09 N N
97 NAQ H54 N H sing 1.01 N N
98 NAQ H55 N H sing 1.01 N N