Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : M3L    

Bonds between two atoms of the molecule

Total Number of Bonds: 33


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N CA N C sing 1.47 N N
2 N H N H sing 1.01 N N
3 N H2 N H sing 1.01 N N
4 CA CB C C sing 1.53 N N
5 CA C C C sing 1.51 N N
6 CA HA C H sing 1.09 N N
7 CB CG C C sing 1.53 N N
8 CB HB2 C H sing 1.09 N N
9 CB HB3 C H sing 1.09 N N
10 CG CD C C sing 1.53 N N
11 CG HG2 C H sing 1.09 N N
12 CG HG3 C H sing 1.09 N N
13 CD CE C C sing 1.53 N N
14 CD HD2 C H sing 1.09 N N
15 CD HD3 C H sing 1.09 N N
16 CE NZ C N sing 1.47 N N
17 CE HE2 C H sing 1.09 N N
18 CE HE3 C H sing 1.09 N N
19 NZ CM1 N C sing 1.47 N N
20 NZ CM2 N C sing 1.47 N N
21 NZ CM3 N C sing 1.47 N N
22 C O C O doub 1.21 N N
23 C OXT C O sing 1.34 N N
24 OXT HXT O H sing 0.97 N N
25 CM1 HM11 C H sing 1.09 N N
26 CM1 HM12 C H sing 1.09 N N
27 CM1 HM13 C H sing 1.09 N N
28 CM2 HM21 C H sing 1.09 N N
29 CM2 HM22 C H sing 1.09 N N
30 CM2 HM23 C H sing 1.09 N N
31 CM3 HM31 C H sing 1.09 N N
32 CM3 HM32 C H sing 1.09 N N
33 CM3 HM33 C H sing 1.09 N N