Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : M7D    

Bonds between two atoms of the molecule

Total Number of Bonds: 49


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O10 C9 O C doub 1.21 N N
2 C5 C4 C C doub 1.38 N Y
3 C5 C6 C C sing 1.39 N Y
4 C4 C3 C C sing 1.4 N Y
5 C9 C6 C C sing 1.48 N N
6 C9 N11 C N sing 1.35 N N
7 C6 N7 C N doub 1.33 N Y
8 C3 C2 C C sing 1.43 N N
9 C3 C8 C C doub 1.4 N Y
10 C2 N1 C N trip 1.14 N N
11 C18 C17 C C doub 1.38 N Y
12 C18 C12 C C sing 1.39 N Y
13 C17 C15 C C sing 1.39 N Y
14 N7 C8 N C sing 1.31 N Y
15 N11 C12 N C sing 1.4 N N
16 C12 C13 C C doub 1.39 N Y
17 C15 F16 C F sing 1.35 N N
18 C15 C14 C C doub 1.38 N Y
19 C13 C14 C C sing 1.38 N Y
20 C14 C19 C C sing 1.51 N N
21 C20 C19 C C sing 1.53 N N
22 C19 N21 C N sing 1.46 N N
23 C19 C29 C C sing 1.53 N N
24 N21 C22 N C doub 1.31 N N
25 C29 N28 C N sing 1.47 N N
26 N28 C27 N C sing 1.35 N Y
27 N28 C24 N C sing 1.39 N Y
28 C22 C24 C C sing 1.47 N N
29 C22 N23 C N sing 1.38 N N
30 C27 C26 C C doub 1.36 N Y
31 C24 C25 C C doub 1.35 N Y
32 C26 C25 C C sing 1.41 N Y
33 C4 H1 C H sing 1.08 N N
34 C5 H2 C H sing 1.08 N N
35 C8 H3 C H sing 1.08 N N
36 C17 H4 C H sing 1.08 N N
37 C18 H5 C H sing 1.08 N N
38 C27 H6 C H sing 1.08 N N
39 C13 H7 C H sing 1.08 N N
40 C20 H8 C H sing 1.09 N N
41 C20 H9 C H sing 1.09 N N
42 C20 H10 C H sing 1.09 N N
43 C25 H11 C H sing 1.08 N N
44 C26 H12 C H sing 1.08 N N
45 C29 H13 C H sing 1.09 N N
46 C29 H14 C H sing 1.09 N N
47 N11 H15 N H sing 0.97 N N
48 N23 H16 N H sing 0.97 N N
49 N23 H17 N H sing 0.97 N N