Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : M7Y    

Bonds between two atoms of the molecule

Total Number of Bonds: 52


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C18 C17 C C sing 1.53 N N
2 C19 C17 C C sing 1.53 N N
3 C17 C16 C C sing 1.54 N N
4 C17 N13 C N sing 1.47 N N
5 C2 C1 C C doub 1.39 N Y
6 C2 C3 C C sing 1.38 N Y
7 C1 C6 C C sing 1.38 N Y
8 C3 C4 C C doub 1.39 N Y
9 N10 O11 N O sing 1.42 N N
10 N10 C9 N C sing 1.35 N N
11 C16 N15 C N sing 1.47 N N
12 C6 C5 C C doub 1.4 N Y
13 C8 C9 C C sing 1.46 N N
14 C8 C7 C C doub 1.35 E N
15 C4 C5 C C sing 1.41 N Y
16 C4 N13 C N sing 1.39 N N
17 C5 C7 C C sing 1.47 N N
18 N13 C14 N C sing 1.34 N N
19 C9 O12 C O doub 1.22 N N
20 N15 C14 N C sing 1.34 N N
21 N15 C21 N C sing 1.46 N N
22 C14 O20 C O doub 1.22 N N
23 C22 C21 C C sing 1.54 N N
24 C22 C23 C C sing 1.55 N N
25 C21 C25 C C sing 1.54 N N
26 C23 C24 C C sing 1.55 N N
27 C25 C24 C C sing 1.54 N N
28 C6 H1 C H sing 1.08 N N
29 C7 H2 C H sing 1.08 N N
30 C8 H3 C H sing 1.08 N N
31 C21 H4 C H sing 1.09 N N
32 C22 H5 C H sing 1.09 N N
33 C22 H6 C H sing 1.09 N N
34 C24 H7 C H sing 1.09 N N
35 C24 H8 C H sing 1.09 N N
36 C1 H9 C H sing 1.08 N N
37 C2 H10 C H sing 1.08 N N
38 C3 H11 C H sing 1.08 N N
39 N10 H12 N H sing 0.97 N N
40 O11 H13 O H sing 0.97 N N
41 C16 H14 C H sing 1.09 N N
42 C16 H15 C H sing 1.09 N N
43 C18 H16 C H sing 1.09 N N
44 C18 H17 C H sing 1.09 N N
45 C18 H18 C H sing 1.09 N N
46 C19 H19 C H sing 1.09 N N
47 C19 H20 C H sing 1.09 N N
48 C19 H21 C H sing 1.09 N N
49 C23 H22 C H sing 1.09 N N
50 C23 H23 C H sing 1.09 N N
51 C25 H24 C H sing 1.09 N N
52 C25 H25 C H sing 1.09 N N