Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : M9U    

Bonds between two atoms of the molecule

Total Number of Bonds: 40


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N2 N1 N N sing 1.29 N Y
2 N2 C9 N C doub 1.3 N Y
3 N1 C8 N C doub 1.31 N Y
4 C9 N3 C N sing 1.36 N Y
5 C8 N3 C N sing 1.36 N Y
6 C8 N C N sing 1.39 N N
7 N3 C10 N C sing 1.46 N N
8 N C7 N C sing 1.35 N N
9 C12 C10 C C sing 1.53 N N
10 C12 C11 C C sing 1.53 N N
11 C10 C11 C C sing 1.53 N N
12 O1 C7 O C doub 1.21 N N
13 C7 C6 C C sing 1.51 N N
14 C5 C6 C C sing 1.53 N N
15 C5 C4 C C sing 1.53 N N
16 C6 C13 C C sing 1.51 N N
17 C4 O C O sing 1.43 N N
18 C13 C14 C C doub 1.38 N Y
19 C13 C3 C C sing 1.39 N Y
20 C14 C C C sing 1.38 N Y
21 O C3 O C sing 1.36 N N
22 C3 C2 C C doub 1.39 N Y
23 C CL C CL sing 1.74 N N
24 C C1 C C doub 1.38 N Y
25 C2 C1 C C sing 1.38 N Y
26 C4 H1 C H sing 1.09 N N
27 C4 H2 C H sing 1.09 N N
28 C5 H3 C H sing 1.09 N N
29 C5 H4 C H sing 1.09 N N
30 C6 H5 C H sing 1.09 N N
31 C10 H6 C H sing 1.09 N N
32 C2 H7 C H sing 1.08 N N
33 C1 H8 C H sing 1.08 N N
34 C14 H9 C H sing 1.08 N N
35 N H10 N H sing 0.97 N N
36 C9 H11 C H sing 1.08 N N
37 C12 H12 C H sing 1.09 N N
38 C12 H13 C H sing 1.09 N N
39 C11 H14 C H sing 1.09 N N
40 C11 H15 C H sing 1.09 N N