Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
ME9
Bonds between two atoms of the molecule
Total Number of Bonds: 31
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
OAA
CAM
O
C
doub
1.21
N
N
2
OAB
CAN
O
C
doub
1.21
N
N
3
CAO
OAC
C
O
doub
1.21
N
N
4
OAD
CAP
O
C
doub
1.21
N
N
5
CAM
CAE
C
C
sing
1.48
N
N
6
CAF
CAE
C
C
doub
1.34
N
N
7
CAE
HAE
C
H
sing
1.08
N
N
8
CAN
CAF
C
C
sing
1.48
N
N
9
CAF
HAF
C
H
sing
1.08
N
N
10
CAH
CAG
C
C
doub
1.34
N
N
11
CAO
CAG
C
C
sing
1.48
N
N
12
CAG
HAG
C
H
sing
1.08
N
N
13
CAP
CAH
C
C
sing
1.48
N
N
14
CAH
HAH
C
H
sing
1.08
N
N
15
CAJ
CAI
C
C
sing
1.53
N
N
16
CAI
CAK
C
C
sing
1.53
N
N
17
CAI
HAI
C
H
sing
1.09
N
N
18
CAI
HAIA
C
H
sing
1.09
N
N
19
CAJ
CAL
C
C
sing
1.53
N
N
20
CAJ
HAJ
C
H
sing
1.09
N
N
21
CAJ
HAJA
C
H
sing
1.09
N
N
22
CAK
NAQ
C
N
sing
1.46
N
N
23
CAK
HAK
C
H
sing
1.09
N
N
24
CAK
HAKA
C
H
sing
1.09
N
N
25
CAL
NAR
C
N
sing
1.46
N
N
26
CAL
HAL
C
H
sing
1.09
N
N
27
CAL
HALA
C
H
sing
1.09
N
N
28
NAQ
CAM
N
C
sing
1.35
N
N
29
NAQ
CAN
N
C
sing
1.34
N
N
30
NAR
CAO
N
C
sing
1.35
N
N
31
CAP
NAR
C
N
sing
1.34
N
N