Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : MM9    

Bonds between two atoms of the molecule

Total Number of Bonds: 71


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C sing 1.53 N N
2 C1 C6 C C sing 1.53 N N
3 C1 C8 C C sing 1.53 N N
4 C2 C3 C C sing 1.53 N N
5 C3 C4 C C sing 1.53 N N
6 C4 C5 C C sing 1.53 N N
7 C5 C6 C C sing 1.53 N N
8 N7 C8 N C sing 1.47 N N
9 N7 C28 N C sing 1.47 N N
10 C8 C9 C C sing 1.51 N N
11 C9 O0 C O doub 1.21 N N
12 C9 N11 C N sing 1.35 N N
13 N11 C12 N C sing 1.47 N N
14 N11 C27 N C sing 1.47 N N
15 C12 C13 C C sing 1.51 N N
16 C12 C26 C C sing 1.54 N N
17 C13 O14 C O doub 1.21 N N
18 C13 N15 C N sing 1.35 N N
19 N15 C16 N C sing 1.46 N N
20 C16 C17 C C sing 1.51 N N
21 C17 C18 C C sing 1.38 N Y
22 C17 C22 C C doub 1.38 N Y
23 C18 C19 C C doub 1.38 N Y
24 C19 C20 C C sing 1.39 N Y
25 C20 C21 C C doub 1.39 N Y
26 C20 C23 C C sing 1.48 N N
27 C21 C22 C C sing 1.38 N Y
28 C23 N24 C N doub 1.3 N N
29 C23 N25 C N sing 1.38 N N
30 C26 C27 C C sing 1.54 N N
31 C28 C29 C C sing 1.51 N N
32 C10 N2 C N sing 1.46 N N
33 C29 O30 C O doub 1.21 N N
34 C29 N2 C N sing 1.35 N N
35 C30 N2 C N sing 1.47 N N
36 C12 H22 C H sing 1.09 N N
37 C1 H1 C H sing 1.09 N N
38 C2 H21C C H sing 1.09 N N
39 C2 H22C C H sing 1.09 N N
40 C6 H61C C H sing 1.09 N N
41 C6 H62C C H sing 1.09 N N
42 C8 H8 C H sing 1.09 N N
43 C3 H31C C H sing 1.09 N N
44 C3 H32C C H sing 1.09 N N
45 C4 H41C C H sing 1.09 N N
46 C4 H42C C H sing 1.09 N N
47 C5 H51C C H sing 1.09 N N
48 C5 H52C C H sing 1.09 N N
49 N7 H7 N H sing 1.01 N N
50 C28 H281 C H sing 1.09 N N
51 C28 H282 C H sing 1.09 N N
52 C27 H271 C H sing 1.09 N N
53 C27 H272 C H sing 1.09 N N
54 C26 H261 C H sing 1.09 N N
55 C26 H262 C H sing 1.09 N N
56 N15 H15 N H sing 0.97 N N
57 C16 H161 C H sing 1.09 N N
58 C16 H162 C H sing 1.09 N N
59 C18 H18 C H sing 1.08 N N
60 C22 HA C H sing 1.08 N N
61 C19 H19 C H sing 1.08 N N
62 C21 H21 C H sing 1.08 N N
63 N24 H24 N H sing 0.97 N N
64 N25 H251 N H sing 0.97 N N
65 N25 H252 N H sing 0.97 N N
66 C10 H101 C H sing 1.09 N N
67 C10 H102 C H sing 1.09 N N
68 C10 H103 C H sing 1.09 N N
69 C30 H301 C H sing 1.09 N N
70 C30 H302 C H sing 1.09 N N
71 C30 H303 C H sing 1.09 N N