Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : MRJ    

Bonds between two atoms of the molecule

Total Number of Bonds: 80


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C11 C10 C C sing 1.53 N N
2 C11 C12 C C sing 1.53 N N
3 C10 C9 C C sing 1.53 N N
4 C13 C12 C C sing 1.53 N N
5 C9 C8 C C sing 1.53 N N
6 C8 C7 C C sing 1.53 N N
7 C7 C6 C C sing 1.53 N N
8 C6 C5 C C sing 1.53 N N
9 C5 C4 C C sing 1.53 N N
10 C4 C3 C C sing 1.53 N N
11 C3 C2 C C sing 1.51 N N
12 O14 C2 O C doub 1.21 N N
13 C2 N1 C N sing 1.35 N N
14 N1 C43 N C sing 1.46 N N
15 C43 C42 C C sing 1.53 N N
16 C42 N41 C N sing 1.47 N N
17 N41 C39 N C sing 1.35 N N
18 C39 C38 C C sing 1.51 N N
19 C39 O40 C O doub 1.21 N N
20 C38 C37 C C sing 1.53 N N
21 C30 C29 C C sing 1.53 N N
22 C37 N36 C N sing 1.46 N N
23 N36 C34 N C sing 1.35 N N
24 C29 C31 C C sing 1.53 N N
25 C29 C28 C C sing 1.53 N N
26 C29 C32 C C sing 1.53 N N
27 C28 O27 C O sing 1.43 N N
28 C34 C32 C C sing 1.51 N N
29 C34 O35 C O doub 1.21 N N
30 O33 C32 O C sing 1.43 N N
31 O27 P24 O P sing 1.61 N N
32 O23 P24 O P sing 1.61 N N
33 P24 O25 P O sing 1.61 N N
34 O23 H1 O H sing 0.97 N N
35 O25 H2 O H sing 0.97 N N
36 C28 H3 C H sing 1.09 N N
37 C28 H4 C H sing 1.09 N N
38 C30 H5 C H sing 1.09 N N
39 C30 H6 C H sing 1.09 N N
40 C30 H7 C H sing 1.09 N N
41 C31 H8 C H sing 1.09 N N
42 C31 H9 C H sing 1.09 N N
43 C31 H10 C H sing 1.09 N N
44 C32 H11 C H sing 1.09 N N
45 O33 H12 O H sing 0.97 N N
46 N36 H13 N H sing 0.97 N N
47 C37 H14 C H sing 1.09 N N
48 C37 H15 C H sing 1.09 N N
49 C38 H16 C H sing 1.09 N N
50 C38 H17 C H sing 1.09 N N
51 N41 H18 N H sing 0.97 N N
52 C42 H19 C H sing 1.09 N N
53 C42 H20 C H sing 1.09 N N
54 C43 H21 C H sing 1.09 N N
55 C43 H22 C H sing 1.09 N N
56 C10 H23 C H sing 1.09 N N
57 C10 H24 C H sing 1.09 N N
58 C11 H25 C H sing 1.09 N N
59 C11 H26 C H sing 1.09 N N
60 C12 H27 C H sing 1.09 N N
61 C12 H28 C H sing 1.09 N N
62 C13 H29 C H sing 1.09 N N
63 C13 H30 C H sing 1.09 N N
64 C13 H31 C H sing 1.09 N N
65 C3 H32 C H sing 1.09 N N
66 C3 H33 C H sing 1.09 N N
67 C4 H34 C H sing 1.09 N N
68 C4 H35 C H sing 1.09 N N
69 C5 H36 C H sing 1.09 N N
70 C5 H37 C H sing 1.09 N N
71 C6 H38 C H sing 1.09 N N
72 C6 H39 C H sing 1.09 N N
73 C7 H40 C H sing 1.09 N N
74 C7 H41 C H sing 1.09 N N
75 C8 H42 C H sing 1.09 N N
76 C8 H43 C H sing 1.09 N N
77 C9 H44 C H sing 1.09 N N
78 C9 H45 C H sing 1.09 N N
79 N1 H46 N H sing 0.97 N N
80 P24 O1 P O doub 1.48 N N