Chemical Components in the PDB

pdbe.org/chem
spacer

PDBeChem : Chemical Bonds

 Molecule : MXI    

Bonds between two atoms of the molecule

Total Number of Bonds: 55


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 N26 C8 N C sing 1.39 N N
2 C8 N9 C N doub 1.32 N Y
3 C8 C7 C C sing 1.39 N Y
4 N9 C10 N C sing 1.32 N Y
5 C10 C11 C C doub 1.38 N Y
6 C11 C6 C C sing 1.4 N Y
7 C7 C6 C C doub 1.4 N Y
8 C6 C5 C C sing 1.48 N N
9 C5 N1 C N sing 1.38 N Y
10 C5 C4 C C doub 1.38 N Y
11 N1 C2 N C sing 1.35 N Y
12 C2 C22 C C sing 1.51 N N
13 C2 N3 C N doub 1.3 N Y
14 C22 C24 C C sing 1.53 N N
15 C22 C23 C C sing 1.53 N N
16 C22 C25 C C sing 1.53 N N
17 C4 N3 C N sing 1.35 N Y
18 C4 C12 C C sing 1.48 N N
19 C12 C21 C C doub 1.38 N Y
20 C12 C13 C C sing 1.41 N Y
21 C21 C20 C C sing 1.4 N Y
22 C20 C15 C C doub 1.42 N Y
23 C20 C19 C C sing 1.41 N Y
24 C15 C14 C C sing 1.41 N Y
25 C15 C16 C C sing 1.4 N Y
26 C14 C13 C C doub 1.36 N Y
27 C19 C18 C C doub 1.36 N Y
28 C18 C17 C C sing 1.4 N Y
29 C17 C16 C C doub 1.37 N Y
30 C17 O27 C O sing 1.36 N N
31 O27 C28 O C sing 1.43 N N
32 N26 H261 N H sing 0.97 N N
33 N26 H262 N H sing 0.97 N N
34 C7 H7 C H sing 1.08 N N
35 C10 H10 C H sing 1.08 N N
36 C11 H11 C H sing 1.08 N N
37 N1 H1 N H sing 0.97 N N
38 C24 H241 C H sing 1.09 N N
39 C24 H242 C H sing 1.09 N N
40 C24 H243 C H sing 1.09 N N
41 C23 H231 C H sing 1.09 N N
42 C23 H232 C H sing 1.09 N N
43 C23 H233 C H sing 1.09 N N
44 C25 H251 C H sing 1.09 N N
45 C25 H252 C H sing 1.09 N N
46 C25 H253 C H sing 1.09 N N
47 C21 H21 C H sing 1.08 N N
48 C13 H13 C H sing 1.08 N N
49 C19 H19 C H sing 1.08 N N
50 C14 H14 C H sing 1.08 N N
51 C16 H16 C H sing 1.08 N N
52 C18 H18 C H sing 1.08 N N
53 C28 H281 C H sing 1.09 N N
54 C28 H282 C H sing 1.09 N N
55 C28 H283 C H sing 1.09 N N