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PDBeChem : Chemical Bonds
Molecule :
NHD
Bonds between two atoms of the molecule
Total Number of Bonds: 74
50
10 per page
20 per page
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Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
PA
O1A
P
O
doub
1.48
N
N
2
PA
O2A
P
O
sing
1.61
N
N
3
PA
O5B
P
O
sing
1.61
N
N
4
PA
O3
P
O
sing
1.61
N
N
5
O2A
HOA2
O
H
sing
0.97
N
N
6
O5B
C5B
O
C
sing
1.43
N
N
7
C5B
C4B
C
C
sing
1.53
N
N
8
C5B
H51A
C
H
sing
1.09
N
N
9
C5B
H52A
C
H
sing
1.09
N
N
10
C4B
O4B
C
O
sing
1.44
N
N
11
C4B
C3B
C
C
sing
1.54
N
N
12
C4B
H4B
C
H
sing
1.09
N
N
13
O4B
C1B
O
C
sing
1.44
N
N
14
C3B
O3B
C
O
sing
1.43
N
N
15
C3B
C2B
C
C
sing
1.55
N
N
16
C3B
H3B
C
H
sing
1.09
N
N
17
O3B
HO3A
O
H
sing
0.97
N
N
18
C2B
O2B
C
O
sing
1.43
N
N
19
C2B
C1B
C
C
sing
1.55
N
N
20
C2B
H2B
C
H
sing
1.09
N
N
21
O2B
HO2A
O
H
sing
0.97
N
N
22
C1B
N9A
C
N
sing
1.47
N
N
23
C1B
H1B
C
H
sing
1.09
N
N
24
N9A
C8A
N
C
sing
1.36
N
Y
25
N9A
C4A
N
C
sing
1.37
N
Y
26
C8A
N7A
C
N
doub
1.3
N
Y
27
C8A
H8A
C
H
sing
1.08
N
N
28
N7A
C5A
N
C
sing
1.35
N
Y
29
C5A
C6A
C
C
sing
1.4
N
Y
30
C5A
C4A
C
C
doub
1.41
N
Y
31
C6A
O6A
C
O
sing
1.35
N
N
32
C6A
N1A
C
N
doub
1.33
N
Y
33
O6A
H6A
O
H
sing
0.97
N
N
34
N1A
C2A
N
C
sing
1.32
N
Y
35
C2A
N3A
C
N
doub
1.32
N
Y
36
C2A
H2A
C
H
sing
1.08
N
N
37
N3A
C4A
N
C
sing
1.33
N
Y
38
O3
PN
O
P
sing
1.61
N
N
39
PN
O1N
P
O
doub
1.55
N
N
40
PN
O2N
P
O
sing
1.54
N
N
41
PN
O5D
P
O
sing
1.61
N
N
42
O5D
C5D
O
C
sing
1.43
N
N
43
C5D
C4D
C
C
sing
1.53
N
N
44
C5D
H51N
C
H
sing
1.09
N
N
45
C5D
H52N
C
H
sing
1.09
N
N
46
C4D
O4D
C
O
sing
1.44
N
N
47
C4D
C3D
C
C
sing
1.55
N
N
48
C4D
H4D
C
H
sing
1.09
N
N
49
O4D
C1D
O
C
sing
1.44
N
N
50
C3D
O3D
C
O
sing
1.43
N
N
51
C3D
C2D
C
C
sing
1.55
N
N
52
C3D
H3D
C
H
sing
1.09
N
N
53
O3D
HO3N
O
H
sing
0.97
N
N
54
C2D
O2D
C
O
sing
1.43
N
N
55
C2D
C1D
C
C
sing
1.54
N
N
56
C2D
H2D
C
H
sing
1.09
N
N
57
O2D
HO2N
O
H
sing
0.97
N
N
58
C1D
N1N
C
N
sing
1.46
N
N
59
C1D
H1D
C
H
sing
1.09
N
N
60
N1N
C2N
N
C
sing
1.32
N
Y
61
N1N
C6N
N
C
doub
1.32
N
Y
62
C2N
C3N
C
C
doub
1.4
N
Y
63
C2N
H2N
C
H
sing
1.08
N
N
64
C3N
C7N
C
C
sing
1.48
N
N
65
C3N
C4N
C
C
sing
1.4
N
Y
66
C7N
O7N
C
O
doub
1.22
N
N
67
C7N
N7N
C
N
sing
1.35
N
N
68
N7N
H71N
N
H
sing
0.97
N
N
69
N7N
H72N
N
H
sing
0.97
N
N
70
C4N
C5N
C
C
doub
1.38
N
Y
71
C4N
H4N
C
H
sing
1.08
N
N
72
C5N
C6N
C
C
sing
1.38
N
Y
73
C5N
H5N
C
H
sing
1.08
N
N
74
C6N
H6N
C
H
sing
1.08
N
N