Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : NJ7    

Bonds between two atoms of the molecule

Total Number of Bonds: 87


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O41 C40 O C sing 1.43 N N
2 O42 C35 O C sing 1.43 N N
3 C40 C35 C C sing 1.53 N N
4 C40 C01 C C sing 1.51 N N
5 C06 C01 C C doub 1.38 N Y
6 C06 C05 C C sing 1.38 N Y
7 C01 C02 C C sing 1.38 N Y
8 C38 C36 C C sing 1.53 N N
9 C38 C37 C C sing 1.53 N N
10 C05 C04 C C doub 1.38 N Y
11 O14 C13 O C sing 1.43 N N
12 C02 C03 C C doub 1.38 N Y
13 C12 C13 C C sing 1.53 N N
14 C12 N10 C N sing 1.46 N N
15 C11 C37 C C sing 1.53 N N
16 C11 N10 C N sing 1.46 N N
17 C37 C39 C C sing 1.53 N N
18 C13 C15 C C sing 1.53 N N
19 C04 C03 C C sing 1.38 N Y
20 C04 S07 C S sing 1.76 N N
21 N10 S07 N S sing 1.66 N N
22 S07 O08 S O doub 1.42 N N
23 S07 O09 S O doub 1.42 N N
24 C15 C28 C C sing 1.53 N N
25 C15 N16 C N sing 1.47 N N
26 C28 C29 C C sing 1.51 N N
27 N16 C17 N C sing 1.35 N N
28 C29 C34 C C doub 1.38 N Y
29 C29 C30 C C sing 1.38 N Y
30 C17 O19 C O sing 1.35 N N
31 C17 O18 C O doub 1.22 N N
32 O19 C20 O C sing 1.45 N N
33 C34 C33 C C sing 1.38 N Y
34 O22 C21 O C sing 1.44 N N
35 O22 C24 O C sing 1.44 N N
36 C30 C31 C C doub 1.38 N Y
37 C21 C20 C C sing 1.54 N N
38 C20 C23 C C sing 1.54 N N
39 O27 C26 O C sing 1.44 N N
40 O27 C24 O C sing 1.43 N N
41 C26 C25 C C sing 1.55 N N
42 C33 C32 C C doub 1.38 N Y
43 C24 C23 C C sing 1.55 N N
44 C23 C25 C C sing 1.55 N N
45 C31 C32 C C sing 1.38 N Y
46 C13 H131 C H sing 1.09 N N
47 C15 H151 C H sing 1.09 N N
48 C20 H201 C H sing 1.09 N N
49 C21 H212 C H sing 1.09 N N
50 C21 H211 C H sing 1.09 N N
51 C24 H241 C H sing 1.09 N N
52 C26 H261 C H sing 1.09 N N
53 C26 H262 C H sing 1.09 N N
54 C28 H282 C H sing 1.09 N N
55 C28 H281 C H sing 1.09 N N
56 C02 H021 C H sing 1.08 N N
57 C03 H031 C H sing 1.08 N N
58 C05 H051 C H sing 1.08 N N
59 C06 H061 C H sing 1.08 N N
60 C11 H112 C H sing 1.09 N N
61 C11 H111 C H sing 1.09 N N
62 C12 H122 C H sing 1.09 N N
63 C12 H121 C H sing 1.09 N N
64 C23 H231 C H sing 1.09 N N
65 C25 H252 C H sing 1.09 N N
66 C25 H251 C H sing 1.09 N N
67 C30 H301 C H sing 1.08 N N
68 C31 H311 C H sing 1.08 N N
69 C32 H321 C H sing 1.08 N N
70 C33 H331 C H sing 1.08 N N
71 C34 H341 C H sing 1.08 N N
72 C35 H352 C H sing 1.09 N N
73 C35 H351 C H sing 1.09 N N
74 C36 H362 C H sing 1.09 N N
75 C36 H361 C H sing 1.09 N N
76 C36 H363 C H sing 1.09 N N
77 C37 H371 C H sing 1.09 N N
78 C38 H381 C H sing 1.09 N N
79 C38 H382 C H sing 1.09 N N
80 C39 H392 C H sing 1.09 N N
81 C39 H393 C H sing 1.09 N N
82 C39 H391 C H sing 1.09 N N
83 C40 H401 C H sing 1.09 N N
84 N16 H161 N H sing 0.97 N N
85 O14 H141 O H sing 0.97 N N
86 O41 H411 O H sing 0.97 N N
87 O42 H421 O H sing 0.97 N N