Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : NJX    

Bonds between two atoms of the molecule

Total Number of Bonds: 59


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O16 C11 O C sing 1.34 N N
2 O10 C8 O C doub 1.22 N N
3 C7 C6 C C sing 1.51 N N
4 C11 C12 C C sing 1.5 N N
5 C11 C9 C C doub 1.37 N N
6 C8 C9 C C sing 1.47 N N
7 C8 C1 C C sing 1.48 N N
8 O22 C21 O C doub 1.22 N N
9 C12 C13 C C sing 1.53 N N
10 C9 C15 C C sing 1.47 N N
11 C6 C1 C C doub 1.39 N Y
12 C6 C5 C C sing 1.39 N Y
13 C1 C2 C C sing 1.4 N Y
14 C21 C5 C C sing 1.48 N N
15 C21 N20 C N sing 1.35 N N
16 C5 C4 C C doub 1.41 N Y
17 C25 N20 C N sing 1.47 N N
18 C25 C26 C C sing 1.47 N N
19 C15 O17 C O doub 1.21 N N
20 C15 C14 C C sing 1.51 N N
21 C13 C14 C C sing 1.53 N N
22 N20 C19 N C sing 1.34 N N
23 C2 C3 C C doub 1.37 N Y
24 C4 C3 C C sing 1.39 N Y
25 C4 N18 C N sing 1.38 N N
26 C26 C27 C C trip 1.17 N N
27 C19 N18 C N sing 1.34 N N
28 C19 O23 C O doub 1.22 N N
29 N18 C24 N C sing 1.47 N N
30 C27 SI C SI sing 1.9 N N
31 C29 SI C SI sing 1.86 N N
32 C30 SI C SI sing 1.86 N N
33 SI C31 SI C sing 1.86 N N
34 C13 H1 C H sing 1.09 N N
35 C13 H2 C H sing 1.09 N N
36 C24 H3 C H sing 1.09 N N
37 C24 H4 C H sing 1.09 N N
38 C24 H5 C H sing 1.09 N N
39 C2 H6 C H sing 1.08 N N
40 C3 H7 C H sing 1.08 N N
41 C7 H8 C H sing 1.09 N N
42 C7 H9 C H sing 1.09 N N
43 C7 H10 C H sing 1.09 N N
44 C12 H13 C H sing 1.09 N N
45 C12 H14 C H sing 1.09 N N
46 C14 H15 C H sing 1.09 N N
47 C14 H16 C H sing 1.09 N N
48 C25 H17 C H sing 1.09 N N
49 C25 H18 C H sing 1.09 N N
50 C29 H19 C H sing 1.09 N N
51 C29 H20 C H sing 1.09 N N
52 C29 H21 C H sing 1.09 N N
53 C30 H22 C H sing 1.09 N N
54 C30 H23 C H sing 1.09 N N
55 C30 H24 C H sing 1.09 N N
56 C31 H25 C H sing 1.09 N N
57 C31 H26 C H sing 1.09 N N
58 C31 H27 C H sing 1.09 N N
59 O16 H28 O H sing 0.97 N N