Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : NJY    

Bonds between two atoms of the molecule

Total Number of Bonds: 95


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CBN CBG C C sing 1.53 N N
2 CBG NBF C N sing 1.46 N N
3 CBG CBU C C sing 1.53 N N
4 NBF CBD N C sing 1.38 N N
5 CBD NBE C N doub 1.31 N Y
6 CBD OBC C O sing 1.34 N Y
7 NBE CAZ N C sing 1.36 N Y
8 OBC CAY O C sing 1.35 N Y
9 CAZ CAY C C doub 1.4 N Y
10 CAZ CBA C C sing 1.4 N Y
11 CAY CAX C C sing 1.38 N Y
12 CBA CBB C C doub 1.38 N Y
13 CAX CAS C C doub 1.38 N Y
14 CBB CAS C C sing 1.39 N Y
15 CAS SAR C S sing 1.76 N N
16 SAR OAU S O doub 1.42 N N
17 SAR OAV S O doub 1.42 N N
18 SAR NAQ S N sing 1.66 N N
19 CBP NAQ C N sing 1.47 N N
20 CBP CBQ C C sing 1.53 N N
21 NAQ CAP N C sing 1.47 N N
22 CAP CAT C C sing 1.53 N N
23 CBR CBQ C C sing 1.53 N N
24 CBQ CBS C C sing 1.53 N N
25 CAT OBO C O sing 1.43 N N
26 CAT CAO C C sing 1.53 N N
27 CAW CBH C C sing 1.51 N N
28 CAW CAO C C sing 1.53 N N
29 CBM CBH C C doub 1.38 N Y
30 CBM CBL C C sing 1.38 N Y
31 FBT CBL F C sing 1.35 N N
32 CBH CBI C C sing 1.38 N Y
33 CAO NAN C N sing 1.47 N N
34 CBL CBK C C doub 1.38 N Y
35 CBI CBJ C C doub 1.38 N Y
36 CBK CBJ C C sing 1.38 N Y
37 NAN CAL N C sing 1.35 N N
38 OAM CAL O C doub 1.22 N N
39 CAL OAK C O sing 1.35 N N
40 OAK CAF O C sing 1.45 N N
41 CAF CAD C C sing 1.54 N N
42 CAF CAG C C sing 1.55 N N
43 CAC CAD C C sing 1.54 N N
44 CAC OAB C O sing 1.44 N N
45 CAD CAE C C sing 1.56 N N
46 CAG CAJ C C sing 1.54 N N
47 CAG CAH C C sing 1.55 N N
48 OAB CAA O C sing 1.47 N N
49 CAJ OAI C O sing 1.42 N N
50 CAE CAH C C sing 1.54 N N
51 CAE CAA C C sing 1.55 N N
52 CAA OAI C O sing 1.43 N N
53 CAE H1 C H sing 1.09 N N
54 CAH H2 C H sing 1.09 N N
55 CAH H3 C H sing 1.09 N N
56 CAG H4 C H sing 1.09 N N
57 CAJ H5 C H sing 1.09 N N
58 CAJ H6 C H sing 1.09 N N
59 CAA H7 C H sing 1.09 N N
60 CAC H8 C H sing 1.09 N N
61 CAC H9 C H sing 1.09 N N
62 CAD H10 C H sing 1.09 N N
63 CAF H11 C H sing 1.09 N N
64 NAN H12 N H sing 0.97 N N
65 CAO H13 C H sing 1.09 N N
66 CAW H14 C H sing 1.09 N N
67 CAW H15 C H sing 1.09 N N
68 CBM H16 C H sing 1.08 N N
69 CBK H17 C H sing 1.08 N N
70 CBJ H18 C H sing 1.08 N N
71 CBI H19 C H sing 1.08 N N
72 CAT H20 C H sing 1.09 N N
73 OBO H21 O H sing 0.97 N N
74 CAP H22 C H sing 1.09 N N
75 CAP H23 C H sing 1.09 N N
76 CBP H24 C H sing 1.09 N N
77 CBP H25 C H sing 1.09 N N
78 CBQ H26 C H sing 1.09 N N
79 CBS H27 C H sing 1.09 N N
80 CBS H28 C H sing 1.09 N N
81 CBS H29 C H sing 1.09 N N
82 CBR H30 C H sing 1.09 N N
83 CBR H31 C H sing 1.09 N N
84 CBR H32 C H sing 1.09 N N
85 CAX H33 C H sing 1.08 N N
86 CBB H34 C H sing 1.08 N N
87 CBA H35 C H sing 1.08 N N
88 NBF H36 N H sing 0.97 N N
89 CBG H37 C H sing 1.09 N N
90 CBU H38 C H sing 1.09 N N
91 CBU H39 C H sing 1.09 N N
92 CBU H40 C H sing 1.09 N N
93 CBN H41 C H sing 1.09 N N
94 CBN H42 C H sing 1.09 N N
95 CBN H43 C H sing 1.09 N N