Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : NK3    

Bonds between two atoms of the molecule

Total Number of Bonds: 55


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O10 C09 O C doub 1.22 N N
2 C09 N08 C N sing 1.34 N N
3 C09 C11 C C sing 1.42 N N
4 S15 C11 S C sing 1.76 N Y
5 S15 C14 S C sing 1.7 N Y
6 N08 C07 N C sing 1.39 N N
7 C11 C12 C C doub 1.39 N Y
8 C01 C02 C C sing 1.51 N N
9 C07 C02 C C doub 1.39 N Y
10 C07 C06 C C sing 1.4 N Y
11 C14 C13 C C doub 1.33 N Y
12 C02 C03 C C sing 1.38 N Y
13 C12 C06 C C sing 1.48 N N
14 C12 C13 C C sing 1.4 N Y
15 C06 C05 C C doub 1.4 N Y
16 C03 C04 C C doub 1.39 N Y
17 C05 C04 C C sing 1.4 N Y
18 C05 C16 C C sing 1.48 N N
19 C04 O28 C O sing 1.36 N N
20 C17 C16 C C doub 1.39 N Y
21 C17 C18 C C sing 1.38 N Y
22 C16 C21 C C sing 1.39 N Y
23 C18 C19 C C doub 1.38 N Y
24 C21 C20 C C doub 1.38 N Y
25 C19 C20 C C sing 1.38 N Y
26 C19 C22 C C sing 1.51 N N
27 C22 C23 C C sing 1.53 N N
28 C22 C24 C C sing 1.53 N N
29 N25 C24 N C sing 1.47 N N
30 N25 C26 N C sing 1.47 N N
31 N25 C27 N C sing 1.47 N N
32 C24 H1 C H sing 1.09 N N
33 C24 H2 C H sing 1.09 N N
34 C26 H4 C H sing 1.09 N N
35 C26 H5 C H sing 1.09 N N
36 C26 H6 C H sing 1.09 N N
37 C27 H7 C H sing 1.09 N N
38 C27 H8 C H sing 1.09 N N
39 C27 H9 C H sing 1.09 N N
40 C22 H10 C H sing 1.09 N N
41 C21 H11 C H sing 1.08 N N
42 C17 H12 C H sing 1.08 N N
43 C18 H13 C H sing 1.08 N N
44 C13 H14 C H sing 1.08 N N
45 C01 H15 C H sing 1.09 N N
46 C01 H16 C H sing 1.09 N N
47 C01 H17 C H sing 1.09 N N
48 C03 H18 C H sing 1.08 N N
49 C14 H19 C H sing 1.08 N N
50 C20 H20 C H sing 1.08 N N
51 C23 H21 C H sing 1.09 N N
52 C23 H22 C H sing 1.09 N N
53 C23 H23 C H sing 1.09 N N
54 N08 H24 N H sing 0.97 N N
55 O28 H25 O H sing 0.97 N N