Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : O9D    

Bonds between two atoms of the molecule

Total Number of Bonds: 42


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C22 C21 C C doub 1.38 N Y
2 C22 C23 C C sing 1.38 N Y
3 C21 C20 C C sing 1.38 N Y
4 C23 C24 C C doub 1.38 N Y
5 C20 C19 C C doub 1.38 N Y
6 C24 C19 C C sing 1.38 N Y
7 C19 S16 C S sing 1.76 N N
8 C07 C06 C C sing 1.51 N N
9 F09 C08 F C sing 1.35 N N
10 O18 S16 O S doub 1.42 N N
11 S16 O17 S O doub 1.42 N N
12 S16 N15 S N sing 1.66 N N
13 C06 C08 C C doub 1.38 N Y
14 C06 C05 C C sing 1.38 N Y
15 C08 C10 C C sing 1.4 N Y
16 N14 N15 N N sing 1.4 N N
17 N14 C12 N C sing 1.35 N N
18 C05 C04 C C doub 1.39 N Y
19 C10 C12 C C sing 1.48 N N
20 C10 C11 C C doub 1.4 N Y
21 C12 O13 C O doub 1.22 N N
22 C04 C11 C C sing 1.38 N Y
23 C04 O03 C O sing 1.36 N N
24 C02 O03 C O sing 1.43 N N
25 C02 C01 C C sing 1.53 N N
26 C20 H1 C H sing 1.08 N N
27 C21 H2 C H sing 1.08 N N
28 C22 H3 C H sing 1.08 N N
29 C24 H4 C H sing 1.08 N N
30 C01 H5 C H sing 1.09 N N
31 C01 H6 C H sing 1.09 N N
32 C01 H7 C H sing 1.09 N N
33 C02 H8 C H sing 1.09 N N
34 C02 H9 C H sing 1.09 N N
35 C05 H10 C H sing 1.08 N N
36 C07 H11 C H sing 1.09 N N
37 C07 H12 C H sing 1.09 N N
38 C07 H13 C H sing 1.09 N N
39 C11 H14 C H sing 1.08 N N
40 C23 H15 C H sing 1.08 N N
41 N14 H16 N H sing 0.97 N N
42 N15 H17 N H sing 0.97 N N