Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
OCQ
Bonds between two atoms of the molecule
Total Number of Bonds: 27
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
OAD
CD2
O
C
doub
1.21
N
N
2
CD2
CG
C
C
sing
1.51
N
N
3
CD2
NAH
C
N
sing
1.34
N
N
4
NAH
HAH
N
H
sing
0.97
N
N
5
NAH
CAE
N
C
sing
1.47
N
N
6
CAE
HAE1
C
H
sing
1.09
N
N
7
CAE
HAE2
C
H
sing
1.09
N
N
8
CAE
CD1
C
C
sing
1.55
N
N
9
CD1
CG
C
C
sing
1.55
N
N
10
CD1
HD11
C
H
sing
1.09
N
N
11
CD1
HD12
C
H
sing
1.09
N
N
12
CG
CB
C
C
sing
1.53
N
N
13
CG
HG
C
H
sing
1.09
N
N
14
CB
CA
C
C
sing
1.53
N
N
15
CB
HB1
C
H
sing
1.09
N
N
16
CB
HB2
C
H
sing
1.09
N
N
17
CA
C
C
C
sing
1.51
N
N
18
CA
HA
C
H
sing
1.09
N
N
19
CA
N
C
N
sing
1.47
N
N
20
N
H2
N
H
sing
1.01
N
N
21
N
H
N
H
sing
1.01
N
N
22
C
CMK
C
C
sing
1.51
N
N
23
C
O
C
O
doub
1.21
N
N
24
CMK
OMP
C
O
sing
1.43
N
N
25
CMK
HMK1
C
H
sing
1.09
N
N
26
CMK
HMK2
C
H
sing
1.09
N
N
27
OMP
HMP
O
H
sing
0.97
N
N