Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : OFC    

Bonds between two atoms of the molecule

Total Number of Bonds: 35


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C5' C4' C C sing 1.53 N N
2 C5' O5' C O sing 1.43 N N
3 C4' O4' C O sing 1.44 N N
4 C4' C3' C C sing 1.54 N N
5 F2' C2' F C sing 1.4 N N
6 O4' C1' O C sing 1.44 N N
7 OP2 P O P sing 1.61 N N
8 O3' C3' O C sing 1.43 N N
9 C1' C2' C C sing 1.55 N N
10 C1' N1 C N sing 1.47 N N
11 O5' P O P sing 1.61 N N
12 C3' C2' C C sing 1.55 N N
13 P OP1 P O doub 1.48 N N
14 N1 C6 N C sing 1.36 N N
15 N1 C2 N C sing 1.35 N N
16 O2 C2 O C doub 1.22 N N
17 C6 C5 C C doub 1.35 N N
18 C2 N3 C N sing 1.33 N N
19 C5 C4 C C sing 1.41 N N
20 N3 C4 N C doub 1.33 N N
21 C4 N4 C N sing 1.38 N N
22 N4 H41 N H sing 0.97 N N
23 N4 H42 N H sing 0.97 N N
24 C5 H5 C H sing 1.08 N N
25 C6 H6 C H sing 1.08 N N
26 C1' H1' C H sing 1.09 N N
27 C2' H2' C H sing 1.09 N N
28 C3' H3' C H sing 1.09 N N
29 O3' HO3' O H sing 0.97 N N
30 C4' H4' C H sing 1.09 N N
31 C5' H5' C H sing 1.09 N N
32 C5' H5'' C H sing 1.09 N N
33 OP2 HOP2 O H sing 0.97 N N
34 P OP3 P O sing 1.61 N N
35 OP3 HOP3 O H sing 0.97 N N