Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
OGQ
Bonds between two atoms of the molecule
Total Number of Bonds: 76
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
CBH
CBK
C
C
sing
1.51
N
N
2
CBE
CBK
C
C
doub
1.38
N
Y
3
CBE
CBC
C
C
sing
1.38
N
Y
4
CBK
CBF
C
C
sing
1.38
N
Y
5
CBC
CBJ
C
C
doub
1.38
N
Y
6
CBF
CBD
C
C
doub
1.38
N
Y
7
CBJ
CBD
C
C
sing
1.38
N
Y
8
CBJ
CBG
C
C
sing
1.51
N
N
9
CBG
NBI
C
N
sing
1.47
N
N
10
NBI
CAU
N
C
sing
1.35
N
N
11
OAW
CAU
O
C
doub
1.21
N
N
12
CAU
CAP
C
C
sing
1.48
N
N
13
CAP
CAK
C
C
doub
1.39
N
Y
14
CAP
CAT
C
C
sing
1.4
N
Y
15
CAK
CAF
C
C
sing
1.39
N
Y
16
CAT
CAQ
C
C
doub
1.38
N
Y
17
CAF
CAC
C
C
sing
1.47
N
N
18
CAF
CAL
C
C
doub
1.41
N
Y
19
CAQ
CAL
C
C
sing
1.39
N
Y
20
CAB
CAE
C
C
doub
1.35
N
N
21
CAB
CAA
C
C
sing
1.41
N
N
22
CAE
CAJ
C
C
sing
1.46
N
N
23
CAC
CAA
C
C
doub
1.41
N
N
24
CAC
CAG
C
C
sing
1.47
N
N
25
CAL
CBL
C
C
sing
1.48
N
N
26
CBA
NAO
C
N
sing
1.47
N
N
27
CAA
CAD
C
C
sing
1.46
N
N
28
CAJ
NAO
C
N
doub
1.33
N
N
29
CAJ
CAH
C
C
sing
1.41
N
N
30
CAM
CAG
C
C
doub
1.4
N
Y
31
CAM
CAR
C
C
sing
1.36
N
Y
32
CAG
CAN
C
C
sing
1.41
N
Y
33
NAO
CBB
N
C
sing
1.46
N
N
34
CAD
CAH
C
C
doub
1.36
N
N
35
CAD
OAI
C
O
sing
1.35
N
N
36
CAR
CAV
C
C
doub
1.4
N
Y
37
CAN
OAI
C
O
sing
1.35
N
N
38
CAN
CAS
C
C
doub
1.39
N
Y
39
CBL
OBN
C
O
doub
1.21
N
N
40
CBL
OBM
C
O
sing
1.35
N
N
41
CAV
CAS
C
C
sing
1.39
N
Y
42
CAV
NAX
C
N
sing
1.39
N
N
43
CAZ
NAX
C
N
sing
1.47
N
N
44
NAX
CAY
N
C
sing
1.47
N
N
45
CAB
H1
C
H
sing
1.08
N
N
46
CAE
H2
C
H
sing
1.08
N
N
47
CAH
H3
C
H
sing
1.08
N
N
48
CAK
H4
C
H
sing
1.08
N
N
49
CAM
H5
C
H
sing
1.08
N
N
50
CAQ
H6
C
H
sing
1.08
N
N
51
CAR
H7
C
H
sing
1.08
N
N
52
CAS
H8
C
H
sing
1.08
N
N
53
CAT
H9
C
H
sing
1.08
N
N
54
CAY
H10
C
H
sing
1.09
N
N
55
CAY
H11
C
H
sing
1.09
N
N
56
CAY
H12
C
H
sing
1.09
N
N
57
CAZ
H13
C
H
sing
1.09
N
N
58
CAZ
H14
C
H
sing
1.09
N
N
59
CAZ
H15
C
H
sing
1.09
N
N
60
CBA
H16
C
H
sing
1.09
N
N
61
CBA
H17
C
H
sing
1.09
N
N
62
CBA
H18
C
H
sing
1.09
N
N
63
CBB
H19
C
H
sing
1.09
N
N
64
CBB
H20
C
H
sing
1.09
N
N
65
CBB
H21
C
H
sing
1.09
N
N
66
CBC
H22
C
H
sing
1.08
N
N
67
CBD
H23
C
H
sing
1.08
N
N
68
CBE
H24
C
H
sing
1.08
N
N
69
CBF
H25
C
H
sing
1.08
N
N
70
CBG
H26
C
H
sing
1.09
N
N
71
CBG
H27
C
H
sing
1.09
N
N
72
CBH
H28
C
H
sing
1.09
N
N
73
CBH
H29
C
H
sing
1.09
N
N
74
CBH
H30
C
H
sing
1.09
N
N
75
NBI
H31
N
H
sing
0.97
N
N
76
OBM
H32
O
H
sing
0.97
N
N