Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : OPY    

Bonds between two atoms of the molecule

Total Number of Bonds: 32


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O C O C doub 1.21 N N
2 CA C C C sing 1.51 N N
3 C NAM C N sing 1.35 N N
4 N CA N C sing 1.47 N N
5 N HN N H sing 1.01 N N
6 N HNA N H sing 1.01 N N
7 CA CB C C sing 1.53 N N
8 CA HA C H sing 1.09 N N
9 CB CAD C C sing 1.53 N N
10 CB HB C H sing 1.09 N N
11 CB HBA C H sing 1.09 N N
12 CAD NAA C N sing 1.47 N N
13 NAA HNAA N H sing 1.01 N N
14 NAA HNAB N H sing 1.01 N N
15 CAD HAD C H sing 1.09 N N
16 CAD HADA C H sing 1.09 N N
17 CAF CAE C C sing 1.53 N N
18 CAG CAE C C sing 1.53 N N
19 CAE HAE C H sing 1.09 N N
20 CAE HAEA C H sing 1.09 N N
21 CAI CAF C C sing 1.53 N N
22 CAF HAF C H sing 1.09 N N
23 CAF HAFA C H sing 1.09 N N
24 CAJ CAG C C sing 1.53 N N
25 CAG HAG C H sing 1.09 N N
26 CAG HAGA C H sing 1.09 N N
27 NAM CAI N C sing 1.47 N N
28 CAI HAI C H sing 1.09 N N
29 CAI HAIA C H sing 1.09 N N
30 NAM CAJ N C sing 1.47 N N
31 CAJ HAJ C H sing 1.09 N N
32 CAJ HAJA C H sing 1.09 N N