Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
OT4
Bonds between two atoms of the molecule
Total Number of Bonds: 42
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
C11
C04
C
C
sing
1.51
N
N
2
C04
C03
C
C
doub
1.36
N
Y
3
C04
C05
C
C
sing
1.41
N
Y
4
C03
C02
C
C
sing
1.4
N
Y
5
C06
C05
C
C
doub
1.4
N
Y
6
C06
C07
C
C
sing
1.36
N
Y
7
C05
C10
C
C
sing
1.42
N
Y
8
C07
C08
C
C
doub
1.4
N
Y
9
C02
N02
C
N
sing
1.39
N
N
10
C02
N01
C
N
doub
1.32
N
Y
11
C10
N01
C
N
sing
1.34
N
Y
12
C10
C09
C
C
doub
1.4
N
Y
13
C08
C09
C
C
sing
1.38
N
Y
14
C08
C21
C
C
sing
1.48
N
N
15
C21
C26
C
C
doub
1.39
N
Y
16
C21
C22
C
C
sing
1.39
N
Y
17
C26
C25
C
C
sing
1.38
N
Y
18
C22
C23
C
C
doub
1.38
N
Y
19
C25
C24
C
C
doub
1.38
N
Y
20
C23
C24
C
C
sing
1.38
N
Y
21
C23
C27
C
C
sing
1.51
N
N
22
C27
C28
C
C
sing
1.53
N
N
23
C28
N29
C
N
sing
1.47
N
N
24
N29
H1
N
H
sing
1.01
N
N
25
N29
H2
N
H
sing
1.01
N
N
26
C28
H4
C
H
sing
1.09
N
N
27
C28
H5
C
H
sing
1.09
N
N
28
C27
H6
C
H
sing
1.09
N
N
29
C27
H7
C
H
sing
1.09
N
N
30
C22
H8
C
H
sing
1.08
N
N
31
C24
H9
C
H
sing
1.08
N
N
32
C25
H10
C
H
sing
1.08
N
N
33
C26
H11
C
H
sing
1.08
N
N
34
C09
H12
C
H
sing
1.08
N
N
35
C07
H13
C
H
sing
1.08
N
N
36
C06
H14
C
H
sing
1.08
N
N
37
C11
H15
C
H
sing
1.09
N
N
38
C11
H16
C
H
sing
1.09
N
N
39
C11
H17
C
H
sing
1.09
N
N
40
C03
H18
C
H
sing
1.08
N
N
41
N02
H19
N
H
sing
0.97
N
N
42
N02
H20
N
H
sing
0.97
N
N