Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
P63
Bonds between two atoms of the molecule
Total Number of Bonds: 48
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
N01
C02
N
C
doub
1.31
N
Y
2
N01
N05
N
N
sing
1.4
N
Y
3
C02
C03
C
C
sing
1.41
N
Y
4
C02
H02
C
H
sing
1.08
N
N
5
C03
C25
C
C
sing
1.43
N
N
6
C03
C04
C
C
doub
1.4
N
Y
7
C04
N06
C
N
sing
1.34
N
Y
8
C04
N05
C
N
sing
1.37
N
Y
9
N05
C09
N
C
sing
1.37
N
Y
10
N06
C07
N
C
doub
1.32
N
Y
11
C07
N17
C
N
sing
1.38
N
N
12
C07
N08
C
N
sing
1.34
N
Y
13
N08
C09
N
C
doub
1.32
N
Y
14
C09
N10
C
N
sing
1.37
N
N
15
N10
C11
N
C
sing
1.4
N
N
16
N10
HN10
N
H
sing
0.97
N
N
17
C11
C16
C
C
doub
1.39
N
Y
18
C11
C12
C
C
sing
1.39
N
Y
19
C12
C13
C
C
doub
1.38
N
Y
20
C12
H12
C
H
sing
1.08
N
N
21
C13
C14
C
C
sing
1.38
N
Y
22
C13
H13
C
H
sing
1.08
N
N
23
C14
C15
C
C
doub
1.38
N
Y
24
C14
H14
C
H
sing
1.08
N
N
25
C15
C16
C
C
sing
1.38
N
Y
26
C15
H15
C
H
sing
1.08
N
N
27
C16
H16
C
H
sing
1.08
N
N
28
N17
C18
N
C
sing
1.4
N
N
29
N17
HN17
N
H
sing
0.97
N
N
30
C18
C19
C
C
doub
1.39
N
Y
31
C18
C23
C
C
sing
1.39
N
Y
32
C19
C20
C
C
sing
1.39
N
Y
33
C19
H19
C
H
sing
1.08
N
N
34
C20
N27
C
N
sing
1.4
N
N
35
C20
C21
C
C
doub
1.39
N
Y
36
C21
C22
C
C
sing
1.38
N
Y
37
C21
H21
C
H
sing
1.08
N
N
38
C22
C23
C
C
doub
1.38
N
Y
39
C22
H22
C
H
sing
1.08
N
N
40
C23
H23
C
H
sing
1.08
N
N
41
C25
N26
C
N
trip
1.14
N
N
42
N27
C28
N
C
sing
1.35
N
N
43
N27
HN27
N
H
sing
0.97
N
N
44
C28
O29
C
O
doub
1.21
N
N
45
C28
C30
C
C
sing
1.51
N
N
46
C30
H301
C
H
sing
1.09
N
N
47
C30
H302
C
H
sing
1.09
N
N
48
C30
H303
C
H
sing
1.09
N
N