Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : P7U    

Bonds between two atoms of the molecule

Total Number of Bonds: 92


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C10 C11 C C sing 1.48 N N
2 C10 C09 C C doub 1.38 N Y
3 C10 C53 C C sing 1.42 N Y
4 C14 C15 C C doub 1.42 N Y
5 C14 C12 C C sing 1.4 N Y
6 C14 N52 C N sing 1.34 N Y
7 C15 C16 C C sing 1.4 N Y
8 C15 C18 C C sing 1.42 N Y
9 C16 N17 C N doub 1.31 N Y
10 C11 C12 C C doub 1.39 N Y
11 C11 N17 C N sing 1.33 N Y
12 C12 F13 C F sing 1.35 N N
13 C02 C03 C C doub 1.36 N Y
14 C02 C53 C C sing 1.4 N Y
15 C02 CL01 C CL sing 1.74 N N
16 C03 C04 C C sing 1.39 N Y
17 C04 C05 C C doub 1.36 N Y
18 C05 C06 C C sing 1.41 N Y
19 C06 C07 C C sing 1.41 N Y
20 C06 C53 C C doub 1.42 N Y
21 C07 C08 C C doub 1.36 N Y
22 C08 C09 C C sing 1.39 N Y
23 C18 N19 C N sing 1.38 N N
24 C18 N40 C N doub 1.33 N Y
25 C20 C21 C C sing 1.53 N N
26 C20 N19 C N sing 1.47 N N
27 C21 N22 C N sing 1.47 N N
28 C23 C24 C C sing 1.51 N N
29 C23 N22 C N sing 1.35 N N
30 C23 O34 C O doub 1.21 N N
31 C24 C32 C C sing 1.53 N N
32 C24 O25 C O sing 1.43 N N
33 C32 C33 C C sing 1.53 N N
34 C35 C36 C C sing 1.53 N N
35 C35 C39 C C sing 1.53 N N
36 C35 N22 C N sing 1.47 N N
37 C36 C37 C C sing 1.47 N N
38 C37 N38 C N trip 1.14 N N
39 C39 N19 C N sing 1.47 N N
40 C41 N40 C N sing 1.33 N Y
41 C41 N52 C N doub 1.32 N Y
42 C41 O42 C O sing 1.35 N N
43 C43 C44 C C sing 1.53 N N
44 C43 O42 C O sing 1.43 N N
45 C44 C48 C C sing 1.54 N N
46 C44 C51 C C sing 1.54 N N
47 C44 N45 C N sing 1.48 N N
48 C46 C47 C C sing 1.55 N N
49 C46 N45 C N sing 1.48 N N
50 C47 C48 C C sing 1.55 N N
51 C49 N45 C N sing 1.48 N N
52 C50 C51 C C sing 1.55 N N
53 C24 O1 C O sing 1.43 N N
54 C32 O2 C O sing 1.43 N N
55 C16 H1 C H sing 1.08 N N
56 C03 H2 C H sing 1.08 N N
57 C04 H3 C H sing 1.08 N N
58 C05 H4 C H sing 1.08 N N
59 C07 H5 C H sing 1.08 N N
60 C08 H6 C H sing 1.08 N N
61 C09 H7 C H sing 1.08 N N
62 C20 H8 C H sing 1.09 N N
63 C20 H9 C H sing 1.09 N N
64 C21 H10 C H sing 1.09 N N
65 C21 H11 C H sing 1.09 N N
66 C32 H12 C H sing 1.09 N N
67 C33 H13 C H sing 1.09 N N
68 C33 H14 C H sing 1.09 N N
69 C33 H15 C H sing 1.09 N N
70 C35 H16 C H sing 1.09 N N
71 C36 H17 C H sing 1.09 N N
72 C36 H18 C H sing 1.09 N N
73 C39 H19 C H sing 1.09 N N
74 C39 H20 C H sing 1.09 N N
75 C43 H21 C H sing 1.09 N N
76 C43 H22 C H sing 1.09 N N
77 C46 H23 C H sing 1.09 N N
78 C46 H24 C H sing 1.09 N N
79 C47 H25 C H sing 1.09 N N
80 C47 H26 C H sing 1.09 N N
81 C48 H27 C H sing 1.09 N N
82 C48 H28 C H sing 1.09 N N
83 C49 H29 C H sing 1.09 N N
84 C49 H30 C H sing 1.09 N N
85 C50 H32 C H sing 1.09 N N
86 C50 H33 C H sing 1.09 N N
87 C51 H35 C H sing 1.09 N N
88 C51 H36 C H sing 1.09 N N
89 O25 H38 O H sing 0.97 N N
90 O1 H39 O H sing 0.97 N N
91 O2 H40 O H sing 0.97 N N
92 C49 C50 C C sing 1.56 N N